RNA–Protein interactions for RNA: ENST00000557626.5

TMEM260-215, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 1,262 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-215ENST00000557626 COA4Q9NYJ1 87 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
TMEM260-215ENST00000557626 IGLC7A0M8Q6 106 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 HMX3A6NHT5 357 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 ATG12O94817 140 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 SLC25A6P12236 298 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 FOLR2P14207 255 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 RPL35AP18077 110 aaKnown RBP9.6□□□□□ -0.87
TMEM260-215ENST00000557626 SMCO1Q147U7 214 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 PLGLAQ15195 96 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 TNXAQ16473 311 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 C19orf35Q6ZS72 473 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 Q6ZTC4 211 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 OR10W1Q8NGF6 305 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 OR11H2Q8NH07 326 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 SRSF12Q8WXF0 261 aaKnown RBP9.6□□□□□ -0.87
TMEM260-215ENST00000557626 NDUFAF3Q9BU61 184 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 HRH4Q9H3N8 390 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 PRNDQ9UKY0 176 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 OR51B2Q9Y5P1 312 aa9.6□□□□□ -0.87
TMEM260-215ENST00000557626 GOSR2O14653 212 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 SNAPC5O75971 98 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 NXPH3O95157 252 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 AREGP15514 252 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 EDN2P20800 178 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 HLA-DMBP28068 263 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 MAS1LP35410 378 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 HSPE1P61604 102 aaKnown RBP9.59□□□□□ -0.87
TMEM260-215ENST00000557626 RRAS2P62070 204 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-215ENST00000557626 ID3Q02535 119 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 WT1-ASQ06250 92 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 SPINK9Q5DT21 86 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 ZBTB8BQ8NAP8 495 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-215ENST00000557626 GRPEL2Q8TAA5 225 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 C11orf1Q9H5F2 150 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.59□□□□□ -0.87
TMEM260-215ENST00000557626 MGAT4CQ9UBM8 478 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 HSPB7Q9UBY9 170 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 ZNF257Q9Y2Q1 563 aa9.59□□□□□ -0.87
TMEM260-215ENST00000557626 C2orf70A6NJV1 201 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 SSNA1O43805 119 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 TMEM50AO95807 157 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 APELAP0DMC3 54 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 RPL27AP46776 148 aaKnown RBP9.58□□□□□ -0.88
TMEM260-215ENST00000557626 DEFA5Q01523 94 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 IAH1Q2TAA2 248 aaPredicted RBP9.58□□□□□ -0.88
TMEM260-215ENST00000557626 ZNF343Q6P1L6 599 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 OR1L8Q8NGR8 309 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 OR5B3Q8NH48 314 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 OR4A16Q8NH70 328 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 RNASE11Q8TAA1 199 aaKnown RBP9.58□□□□□ -0.88
TMEM260-215ENST00000557626 C2orf50Q96LR7 162 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 DMRT1Q9Y5R6 373 aa9.58□□□□□ -0.88
TMEM260-215ENST00000557626 KRTAP29-1A8MX34 341 aaPredicted RBP9.57□□□□□ -0.88
TMEM260-215ENST00000557626 H3BUA1 57 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 RBMXL2O75526 392 aaKnown RBP9.57□□□□□ -0.88
TMEM260-215ENST00000557626 MBPP02686 304 aaPredicted RBP9.57□□□□□ -0.88
TMEM260-215ENST00000557626 PAX9P55771 341 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 PRCDQ00LT1 54 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 Q5BKY6 102 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 FYTTD1Q96QD9 318 aaKnown RBP9.57□□□□□ -0.88
TMEM260-215ENST00000557626 COMMD5Q9GZQ3 224 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 MAGT1Q9H0U3 335 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 MED28Q9H204 178 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 RBKSQ9H477 322 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 MAP6D1Q9H9H5 199 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 RCL1Q9Y2P8 373 aaKnown RBP9.57□□□□□ -0.88
TMEM260-215ENST00000557626 NACAE9PAV3 2078 aa9.57□□□□□ -0.88
TMEM260-215ENST00000557626 hCG_2014768A0A024R1R8 64 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 C5orf51A6NDU8 294 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 FAM25EA8MYX2 175 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 INS-IGF2F8WCM5 200 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 G3V3Q6 166 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 H0YIZ8 118 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 TRAPPC2P0DI81 140 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 TRAPPC2BP0DI82 140 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 KRTAP10-2P60368 255 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 SPCS3P61009 180 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 GSG1LQ6UXU4 331 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 OR1L6Q8NGR2 347 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 OR1S1Q8NH92 325 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 FKBP11Q9NYL4 201 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 GSKIPQ9P0R6 139 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 UBQLN2Q9UHD9 624 aa9.56□□□□□ -0.88
TMEM260-215ENST00000557626 PIGBOS1A0A0B4J2F0 54 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 REG1AP05451 166 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 CRYGCP07315 174 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 POLR2GP62487 172 aaKnown RBP eCLIP9.55□□□□□ -0.88
TMEM260-215ENST00000557626 KLK9Q2XQG4 91 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 BSXQ3C1V8 233 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 Q6ZSN1 163 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 TTC9CQ8N5M4 171 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 OR2C3Q8N628 320 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 CACNG8Q8WXS5 425 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 SPIN2AQ99865 258 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 SPIN2BQ9BPZ2 258 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 HINT2Q9BX68 163 aa9.55□□□□□ -0.88
TMEM260-215ENST00000557626 KLK9Q9UKQ9 250 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms