RNA–Protein interactions for RNA: ENST00000557307.1

SYNE2-227, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 526 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-227ENST00000557307 SLC24A4Q8NFF2 622 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 OR52E5Q8NH55 327 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 GLMPQ8WWB7 406 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 SOSTQ9BQB4 213 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 C6orf62Q9GZU0 229 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 ENY2Q9NPA8 101 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 HEYLQ9NQ87 328 aaPredicted RBP7.94□□□□□ -1.14
SYNE2-227ENST00000557307 CLEC5AQ9NY25 188 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 FBXL17Q9UF56 701 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 TMEM56-RWDD3S4R434 201 aa7.94□□□□□ -1.14
SYNE2-227ENST00000557307 FAT2Q9NYQ8 4349 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 CEBPZOSA8MTT3 80 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 GSTZ1O43708 216 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 ATG12O94817 140 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 RBMY1A1P0DJD3 496 aaKnown RBP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 RBMY1CP0DJD4 496 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 NPPCP23582 126 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 TNFSF8P32971 234 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 HTR2BP41595 481 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 SUB1P53999 127 aaKnown RBP eCLIP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 PRR20EP86478 221 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 PRR20CP86479 221 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 PRR20DP86480 221 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 PRR20BP86481 221 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 PRR20AP86496 221 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 DHODHQ02127 395 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 RBMY1FQ15415 496 aaKnown RBP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 SURF2Q15527 256 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 NMSQ5H8A3 153 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 LYZL2Q7Z4W2 148 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 FAM219AQ8IW50 185 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 GATAD1Q8WUU5 269 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 TRIM63Q969Q1 353 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 METTL26Q96S19 204 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 C11orf68Q9H3H3 251 aaKnown RBP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 RBKSQ9H477 322 aa7.93□□□□□ -1.14
SYNE2-227ENST00000557307 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.93□□□□□ -1.14
SYNE2-227ENST00000557307 TRAV2A0A0B4J234 112 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 ATF4P18848 351 aaPredicted RBP7.92□□□□□ -1.14
SYNE2-227ENST00000557307 NPY1RP25929 384 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 OR10J1P30954 320 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 PAFAH1B2P68402 229 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 C16orf54Q6UWD8 224 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 OR1S2Q8NGQ3 325 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 RAB2BQ8WUD1 216 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 C15orf40Q8WUR7 153 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 NPIPB3Q92617 1050 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 ACY3Q96HD9 319 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 X6R8D5 127 aa7.92□□□□□ -1.14
SYNE2-227ENST00000557307 IGKV1D-37A0A075B6S9 117 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 ELOA3CA0A087WX78 387 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-227ENST00000557307 IGHV4-28A0A0C4DH34 117 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 B3GALNT1O75752 331 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 IL4P05112 153 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 HNRNPCP07910 306 aaKnown RBP eCLIP7.91□□□□□ -1.14
SYNE2-227ENST00000557307 SULT1A3P0DMM9 295 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 SULT1A4P0DMN0 295 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 AKR1C4P17516 323 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 TMBIM6P55061 237 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 KLF9Q13886 244 aaPredicted RBP7.91□□□□□ -1.14
SYNE2-227ENST00000557307 ZNF79Q15937 498 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 ACTL10Q5JWF8 245 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 STHQ8IWL8 128 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 CSNK1G2-AS1Q8NCQ2 148 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 C11orf45Q8TAV5 145 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 PRRT1Q99946 306 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 SCRT1Q9BWW7 348 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 MCUBQ9NWR8 336 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 HSPB7Q9UBY9 170 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 CELA1Q9UNI1 258 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 V9GYH0 126 aa7.91□□□□□ -1.14
SYNE2-227ENST00000557307 PSG1P11464 419 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 CMC4P56277 68 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-227ENST00000557307 YPEL3P61236 119 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-227ENST00000557307 ZNF90Q03938 601 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 DHRS2Q13268 280 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 PSMG4Q5JS54 123 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 GDF5OSQ5U4N7 250 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 ZNF767PQ75MW2 155 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 OR51G1Q8NGK1 321 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 RNASEH2CQ8TDP1 164 aaKnown RBP7.9□□□□□ -1.14
SYNE2-227ENST00000557307 DTD1Q8TEA8 209 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 IL22RA2Q969J5 263 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 GRAMD2BQ96HH9 432 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 TMEM231Q9H6L2 316 aa7.9□□□□□ -1.14
SYNE2-227ENST00000557307 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
SYNE2-227ENST00000557307 TRAV30A0A087WSZ9 112 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 A0A0B4J2A0 478 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 RPS10-NUDT3A0A1W2PQS6 291 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 A0A1W2PS18 150 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 ZNF705EA8MWA4 302 aaPredicted RBP7.89□□□□□ -1.15
SYNE2-227ENST00000557307 FAM90A26D6RGX4 464 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 BUB3O43684 328 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 TOMM40O96008 361 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 IAPPP10997 89 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 SMCO1Q147U7 214 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 TMEM217Q8N7C4 229 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 MCFD2Q8NI22 146 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 RAB40CQ96S21 281 aa7.89□□□□□ -1.15
SYNE2-227ENST00000557307 WDR12Q9GZL7 423 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms