RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 OVOL2Q9BRP0 275 aa12.27□□□□□ -0.45
VSX1-207ENST00000557285 HSPB7Q9UBY9 170 aa12.27□□□□□ -0.45
VSX1-207ENST00000557285 RABAC1Q9UI14 185 aa12.27□□□□□ -0.45
VSX1-207ENST00000557285 IFNA4P05014 189 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 SLC25A4P12235 298 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 PPP1R1AQ13522 171 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 FAM90A2PQ658T7 463 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 OR1S2Q8NGQ3 325 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 NPIPB3Q92617 1050 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 SLC25A21Q9BQT8 299 aaPredicted RBP12.26□□□□□ -0.45
VSX1-207ENST00000557285 MS4A6AQ9H2W1 248 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 TMEM231Q9H6L2 316 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 VSIRQ9H7M9 311 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 CACFD1Q9UGQ2 172 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 PAIP2BQ9ULR5 123 aaKnown RBP12.26□□□□□ -0.45
VSX1-207ENST00000557285 CSMD3Q7Z407 3707 aa12.26□□□□□ -0.45
VSX1-207ENST00000557285 TRAV30A0A087WSZ9 112 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 IGLC1P0CG04 106 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 IAPPP10997 89 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 BAK1Q16611 211 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 ETFRF1Q6IPR1 90 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 CENPSQ8N2Z9 138 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 STXBP6Q8NFX7 210 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 NARS2Q96I59 477 aaKnown RBP12.25□□□□□ -0.45
VSX1-207ENST00000557285 MAP6D1Q9H9H5 199 aa12.25□□□□□ -0.45
VSX1-207ENST00000557285 SFT2D2O95562 160 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 HOXB5P09067 269 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 P2RY1P47900 373 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 RBMS2Q15434 407 aaKnown RBP12.24□□□□□ -0.45
VSX1-207ENST00000557285 LEMD1Q68G75 181 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 NOXA1Q86UR1 476 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 FAM24BQ8N5W8 94 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 STPG3Q8N7X2 389 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 Q8WTZ3 238 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 U3KQ87 197 aa12.24□□□□□ -0.45
VSX1-207ENST00000557285 DYNC2H1Q8NCM8 4307 aaKnown RBP12.24□□□□□ -0.45
VSX1-207ENST00000557285 TENM2Q9NT68 2774 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 A0A1W2PS18 150 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 SPRY2O43597 315 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 IL4P05112 153 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 CRYBB3P26998 211 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 DEFB131AP59861 70 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 MAGT1Q9H0U3 335 aa12.23□□□□□ -0.45
VSX1-207ENST00000557285 PIGBOS1A0A0B4J2F0 54 aa12.22□□□□□ -0.45
VSX1-207ENST00000557285 DUXBA0A1W2PPF3 345 aa12.22□□□□□ -0.45
VSX1-207ENST00000557285 CD5P06127 495 aa12.22□□□□□ -0.45
VSX1-207ENST00000557285 CMC4P56277 68 aaPredicted RBP12.22□□□□□ -0.45
VSX1-207ENST00000557285 DEDD2Q8WXF8 326 aa12.22□□□□□ -0.45
VSX1-207ENST00000557285 GRAMD2BQ96HH9 432 aa12.22□□□□□ -0.45
VSX1-207ENST00000557285 FLVCR2Q9UPI3 526 aa12.22□□□□□ -0.45
VSX1-207ENST00000557285 KIR2DL5BA0A0G2JN68 375 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 KIR2DL5BA0A0G2JPC4 375 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 A0A0J9YWU9 116 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 UBE2CO00762 179 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 HNRNPCP07910 306 aaKnown RBP eCLIP12.21□□□□□ -0.45
VSX1-207ENST00000557285 RD3LP0DJH9 198 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 YPEL3P61236 119 aaPredicted RBP12.21□□□□□ -0.45
VSX1-207ENST00000557285 USF2Q15853 346 aaPredicted RBP12.21□□□□□ -0.45
VSX1-207ENST00000557285 Q6ZWC4 215 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 KIR2DL5AQ8N109 375 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 LRTM2Q8N967 370 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 KIR2DL5BQ8NHK3 375 aa12.21□□□□□ -0.45
VSX1-207ENST00000557285 SDHCQ99643 169 aaPredicted RBP12.21□□□□□ -0.45
VSX1-207ENST00000557285 ZFP92A6NM28 416 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 PITX3O75364 302 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 NDUFB6O95139 128 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 ZNF688P0C7X2 276 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 GGNBP1Q5YKI7 109 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 OR51G1Q8NGK1 321 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 IL17DQ8TAD2 202 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 SLC35E1Q96K37 410 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 PBDC1Q9BVG4 233 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 TMED3Q9Y3Q3 217 aa12.2□□□□□ -0.46
VSX1-207ENST00000557285 RYR2Q92736 4967 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 NAP1L6A6NFF2 107 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 CENPXA8MT69 81 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 WRBO00258 174 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 MED6O75586 246 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 ADAP1O75689 374 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 TOMM40O96008 361 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 PSG1P11464 419 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 ANXA7P20073 488 aaKnown RBP12.19□□□□□ -0.46
VSX1-207ENST00000557285 RAB11AP62491 216 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 PMS2P11Q13670 270 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 GAMTQ14353 236 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 LYG2Q86SG7 212 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 RNF183Q96D59 192 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 CSTL1Q9H114 145 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 SACSQ9NZJ4 4579 aa12.19□□□□□ -0.46
VSX1-207ENST00000557285 C9orf170A2RU37 121 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 MPTX1A8MV57 137 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 H3BP45 60 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 K7EQG2 157 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 CA1P00915 261 aaPredicted RBP12.18□□□□□ -0.46
VSX1-207ENST00000557285 SLC25A6P12236 298 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 IL7P13232 177 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 EWSR1Q01844 656 aaKnown RBP eCLIP12.18□□□□□ -0.46
VSX1-207ENST00000557285 ZNF90Q03938 601 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 DHRS2Q13268 280 aa12.18□□□□□ -0.46
VSX1-207ENST00000557285 OR2F1Q13607 317 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms