RNA–Protein interactions for RNA: ENST00000557084.1

SYNE2-226, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 689 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-226ENST00000557084 METTL26Q96S19 204 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 GGTLC1Q9BX51 225 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 FNDC4Q9H6D8 234 aaPredicted RBP8.92□□□□□ -0.98
SYNE2-226ENST00000557084 UBQLN2Q9UHD9 624 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 U3KQ87 197 aa8.92□□□□□ -0.98
SYNE2-226ENST00000557084 IGHV3-66A0A0C4DH42 116 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 A0A1W2PS18 150 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 A6NHS1 94 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 DNASE2O00115 360 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-226ENST00000557084 OR10J1P30954 320 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 RND2P52198 227 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 CMC4P56277 68 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-226ENST00000557084 LINC00322Q6ZN03 302 aaPredicted RBP8.91□□□□□ -0.98
SYNE2-226ENST00000557084 TCF24Q7RTU0 167 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 GBGT1Q8N5D6 347 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 ACY3Q96HD9 319 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 RBKSQ9H477 322 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 RETNQ9HD89 108 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 HSPB7Q9UBY9 170 aa8.91□□□□□ -0.98
SYNE2-226ENST00000557084 PAIP2BQ9ULR5 123 aaKnown RBP8.91□□□□□ -0.98
SYNE2-226ENST00000557084 A6NJY4 79 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 MED6O75586 246 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 SFT2D2O95562 160 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 APOC4P55056 127 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 PPP1R1AQ13522 171 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 BAK1Q16611 211 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 TIGITQ495A1 244 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 PRSS54Q6PEW0 395 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 WFDC3Q8IUB2 231 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 OR1S2Q8NGQ3 325 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 Q8WTZ3 238 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 ST8SIA2Q92186 375 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 GRAMD2BQ96HH9 432 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 FAM110AQ9BQ89 295 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 MRPL36Q9P0J6 103 aaKnown RBP8.9□□□□□ -0.98
SYNE2-226ENST00000557084 TMED3Q9Y3Q3 217 aa8.9□□□□□ -0.98
SYNE2-226ENST00000557084 TENM2Q9NT68 2774 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 DFFBO76075 338 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 HOXB5P09067 269 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 ATP5IP56385 69 aaPredicted RBP8.89□□□□□ -0.99
SYNE2-226ENST00000557084 UBE2MP61081 183 aaKnown RBP8.89□□□□□ -0.99
SYNE2-226ENST00000557084 RPP30P78346 268 aaKnown RBP8.89□□□□□ -0.99
SYNE2-226ENST00000557084 LRTM2Q8N967 370 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 NPIPB3Q92617 1050 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 RABAC1Q9UI14 185 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 DNAH7Q8WXX0 4024 aa8.89□□□□□ -0.99
SYNE2-226ENST00000557084 NDUFB6O95139 128 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 IGKV1-17P01599 117 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 APOHP02749 345 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-226ENST00000557084 RD3LP0DJH9 198 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 IAPPP10997 89 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 SLC25A6P12236 298 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 EIF2B2P49770 351 aaKnown RBP8.88□□□□□ -0.99
SYNE2-226ENST00000557084 RAB11AP62491 216 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 ODF3L2Q3SX64 289 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 C4orf46Q504U0 113 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 STPG3Q8N7X2 389 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 COQ8AQ8NI60 647 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 SLC35E1Q96K37 410 aa8.88□□□□□ -0.99
SYNE2-226ENST00000557084 CIB3Q96Q77 187 aaPredicted RBP8.88□□□□□ -0.99
SYNE2-226ENST00000557084 C7orf50Q9BRJ6 194 aaKnown RBP8.88□□□□□ -0.99
SYNE2-226ENST00000557084 ZFP92A6NM28 416 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 FAM90A26D6RGX4 464 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 IFNA21P01568 189 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 IGLC1P0CG04 106 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 IL7P13232 177 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 RPL35AP18077 110 aaKnown RBP8.87□□□□□ -0.99
SYNE2-226ENST00000557084 YPEL3P61236 119 aaPredicted RBP8.87□□□□□ -0.99
SYNE2-226ENST00000557084 CASC10Q5T4H9 136 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 ZFAND6Q6FIF0 208 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 APRG1Q8IVJ8 170 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 STXBP6Q8NFX7 210 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 TMEM170AQ8WVE7 144 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 ZNF414Q96IQ9 312 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 MAGT1Q9H0U3 335 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 MS4A6AQ9H2W1 248 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 VSIRQ9H7M9 311 aa8.87□□□□□ -0.99
SYNE2-226ENST00000557084 C9orf170A2RU37 121 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 WRBO00258 174 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 UBE2CO00762 179 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 PITX3O75364 302 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 IL4P05112 153 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 FABP1P07148 127 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 HNRNPCP07910 306 aaKnown RBP eCLIP8.86□□□□□ -0.99
SYNE2-226ENST00000557084 CRYBB3P26998 211 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 GPX4P36969 197 aaPredicted RBP8.86□□□□□ -0.99
SYNE2-226ENST00000557084 P2RY1P47900 373 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 CNPY1Q3B7I2 92 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 GGNBP1Q5YKI7 109 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 FAM90A2PQ658T7 463 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 LILRB2Q8N423 598 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 EDA2RQ9HAV5 297 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 PFDN2Q9UHV9 154 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 FLVCR2Q9UPI3 526 aa8.86□□□□□ -0.99
SYNE2-226ENST00000557084 KIR2DL5BA0A0G2JN68 375 aa8.85□□□□□ -0.99
SYNE2-226ENST00000557084 KIR2DL5BA0A0G2JPC4 375 aa8.85□□□□□ -0.99
SYNE2-226ENST00000557084 HELTA6NFD8 242 aa8.85□□□□□ -0.99
SYNE2-226ENST00000557084 SYNGR2O43760 224 aa8.85□□□□□ -0.99
SYNE2-226ENST00000557084 TOMM40O96008 361 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms