RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 PLA2G10O15496 165 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 ST8SIA3O43173 380 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 F2RP25116 425 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 LPAR6P43657 344 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 CCR6P51684 374 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 UCP3P55916 312 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 OR13C8Q8NGS7 320 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 RNF126Q9BV68 326 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 FXYD6Q9H0Q3 95 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 GPN1Q9HCN4 374 aaPredicted RBP9.18□□□□□ -0.94
SHMT2-223ENST00000556689 PRNDQ9UKY0 176 aa9.18□□□□□ -0.94
SHMT2-223ENST00000556689 TRAV2A0A0B4J234 112 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 TEX13DA0A0J9YY54 714 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-223ENST00000556689 GNG7O60262 68 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 PGLYRP1O75594 196 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-223ENST00000556689 TCRBP04435 133 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 GIG44P09565 113 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-223ENST00000556689 G6PCP35575 357 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 UBE2MP61081 183 aaKnown RBP9.17□□□□□ -0.94
SHMT2-223ENST00000556689 IFITM3Q01628 133 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 MORN3Q6PF18 240 aaPredicted RBP9.17□□□□□ -0.94
SHMT2-223ENST00000556689 NRARPQ7Z6K4 114 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 LHFPL1Q86WI0 220 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 LILRB2Q8N423 598 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 POM121L12Q8N7R1 296 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 MARCH1Q8TCQ1 289 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 ST8SIA2Q92186 375 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 VSIRQ9H7M9 311 aa9.17□□□□□ -0.94
SHMT2-223ENST00000556689 TRAV6A0A075B6T7 132 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 IGHV3-66A0A0C4DH42 116 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 ZNF705EA8MWA4 302 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-223ENST00000556689 M0R2N4 97 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 RTL8CO15255 209 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 PRAF2O60831 178 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 B3GALNT1O75752 331 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 MT-CO2P00403 227 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 IGHV3-48P01763 117 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 APOHP02749 345 aaPredicted RBP9.16□□□□□ -0.94
SHMT2-223ENST00000556689 H2AFB2P0C5Z0 115 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 P0DMU3 169 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 FAM231AP0DMU4 169 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 FAM231CP0DMU5 169 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 SPP1P10451 314 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 SRPXP78539 464 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 C4orf46Q504U0 113 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 TOMM20LQ6UXN7 152 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 FAM24BQ8N5W8 94 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 TMEM14BQ9NUH8 114 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 KCNIP3Q9Y2W7 256 aa9.16□□□□□ -0.94
SHMT2-223ENST00000556689 ELOA3CA0A087WX78 387 aaPredicted RBP9.15□□□□□ -0.94
SHMT2-223ENST00000556689 DEFB131BA0A096LNP1 70 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 DBX1A6NMT0 343 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 AKR1C4P17516 323 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 VAMP1P23763 118 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 BTCP35070 178 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 PIGPP57054 158 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 PHLDA2Q53GA4 152 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 TRPT1Q86TN4 253 aaKnown RBP9.15□□□□□ -0.94
SHMT2-223ENST00000556689 PINX1Q96BK5 328 aaKnown RBP9.15□□□□□ -0.94
SHMT2-223ENST00000556689 TMEM231Q9H6L2 316 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
SHMT2-223ENST00000556689 ABCA13Q86UQ4 5058 aa9.15□□□□□ -0.95
SHMT2-223ENST00000556689 DNAH11Q96DT5 4516 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 INMT-MINDY4F8WBC2 141 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 ATG12O94817 140 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 NPBWR1P48145 328 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 ERHP84090 104 aaKnown RBP9.14□□□□□ -0.95
SHMT2-223ENST00000556689 C12orf74Q32Q52 190 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 LGALS9BQ3B8N2 356 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 TMEM128Q5BJH2 165 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 NDUFAF3Q9BU61 184 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 PUS1Q9Y606 427 aaKnown RBP eCLIP9.14□□□□□ -0.95
SHMT2-223ENST00000556689 X6R8D5 127 aa9.14□□□□□ -0.95
SHMT2-223ENST00000556689 A0A1W2PS18 150 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 KNCNA6PVL3 124 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 AMBPP02760 352 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 NPPCP23582 126 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 RND3P61587 244 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 ZNF600Q6ZNG1 722 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 ZNF114Q8NC26 417 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 OR4A16Q8NH70 328 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 COQ8AQ8NI60 647 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 RNASE11Q8TAA1 199 aaKnown RBP9.13□□□□□ -0.95
SHMT2-223ENST00000556689 GRAMD2BQ96HH9 432 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 CLEC5AQ9NY25 188 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 PKD1P98161 4303 aa9.13□□□□□ -0.95
SHMT2-223ENST00000556689 K7EQG2 157 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 TMEM50AO95807 157 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 PI3P19957 117 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 C4BPBP20851 252 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 NPY1RP25929 384 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 OXA1LQ15070 435 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 ZNF767PQ75MW2 155 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 H2BFWTQ7Z2G1 175 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 TBC1D26Q86UD7 250 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 CSNK1G2-AS1Q8NCQ2 148 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 STXBP6Q8NFX7 210 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 MARVELD1Q9BSK0 173 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 NAA60Q9H7X0 242 aa9.12□□□□□ -0.95
SHMT2-223ENST00000556689 ZFAND3Q9H8U3 227 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms