RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 DEFB4AO15263 64 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 ZNF688P0C7X2 276 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 SULT1A3P0DMM9 295 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 SULT1A4P0DMN0 295 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 SLC25A4P12235 298 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 OR10J1P30954 320 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 TMBIM6P55061 237 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 DHRS2Q13268 280 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 RBMS2Q15434 407 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 C2orf83Q53S99 150 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 NOXA1Q86UR1 476 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 OR1S2Q8NGQ3 325 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 C11orf45Q8TAV5 145 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 DYNC2LI1Q8TCX1 351 aa7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 PHLDA1Q8WV24 401 aaPredicted RBP7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 RSL24D1Q9UHA3 163 aaKnown RBP7.77□□□□□ -1.17
SPTLC2-205ENST00000556607 DYNC2H1Q8NCM8 4307 aaKnown RBP7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 TRAV2A0A0B4J234 112 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 CCDC160A6NGH7 325 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 IFNA4P05014 189 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 IL4P05112 153 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 HNRNPCP07910 306 aaKnown RBP eCLIP7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 ANXA3P12429 323 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 NPY1RP25929 384 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 CRYBB3P26998 211 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 BSXQ3C1V8 233 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 PVRIGQ6DKI7 326 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 PRSS54Q6PEW0 395 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 OR1S1Q8NH92 325 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 MCFD2Q8NI22 146 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 RNASEH2CQ8TDP1 164 aaKnown RBP7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 NPIPB3Q92617 1050 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 ACY3Q96HD9 319 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 CACFD1Q9UGQ2 172 aa7.76□□□□□ -1.17
SPTLC2-205ENST00000556607 KNCNA6PVL3 124 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 K7EQG2 157 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 GSTZ1O43708 216 aaPredicted RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 IGKV1-17P01599 117 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 ATF4P18848 351 aaPredicted RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 TNFSF8P32971 234 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 FAUP35544 74 aaKnown RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 AP2S1P53680 142 aaPredicted RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 NANOS2P60321 138 aaKnown RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 YPEL3P61236 119 aaPredicted RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 PYDC2Q56P42 97 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 ACTL10Q5JWF8 245 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 TMED4Q7Z7H5 227 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 LGI3Q8N145 548 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 DTD1Q8TEA8 209 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 IL22RA2Q969J5 263 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 BCL7BQ9BQE9 202 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 MFFQ9GZY8 342 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 PAIP2BQ9ULR5 123 aaKnown RBP7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 TMEM56-RWDD3S4R434 201 aa7.75□□□□□ -1.17
SPTLC2-205ENST00000556607 HELTA6NFD8 242 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 H3BMQ9 156 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 IGLC1P0CG04 106 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 RD3LP0DJH9 198 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 CCR6P51684 374 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 SMCO1Q147U7 214 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 AARDQ4LEZ3 155 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 PSMG4Q5JS54 123 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 LYZL2Q7Z4W2 148 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 CENPSQ8N2Z9 138 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 TOMM5Q8N4H5 51 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 PBDC1Q9BVG4 233 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 RBKSQ9H477 322 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 U3KQ87 197 aa7.74□□□□□ -1.17
SPTLC2-205ENST00000556607 A0A0B4J2A0 478 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 ZFP92A6NM28 416 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 TOMM40O96008 361 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 SPP1P10451 314 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 AP3S2P59780 193 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 SNRPD3P62318 126 aaKnown RBP7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 SRPXP78539 464 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 USF2Q15853 346 aaPredicted RBP7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 MORN3Q6PF18 240 aaPredicted RBP7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 C16orf54Q6UWD8 224 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 OR51G1Q8NGK1 321 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 SLIRPQ9GZT3 109 aaKnown RBP7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 C11orf68Q9H3H3 251 aaKnown RBP7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 CLEC5AQ9NY25 188 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 SHPKQ9UHJ6 478 aa7.73□□□□□ -1.17
SPTLC2-205ENST00000556607 VAMP1P23763 118 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 S100A5P33763 92 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 KLF9Q13886 244 aaPredicted RBP7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 TMEM41BQ5BJD5 291 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 NMSQ5H8A3 153 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 SIGLEC15Q6ZMC9 328 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 TRPT1Q86TN4 253 aaKnown RBP7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 DCANP1Q8TF63 244 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 TMEM170AQ8WVE7 144 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 SLC35E1Q96K37 410 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 RAB40CQ96S21 281 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 HSPB7Q9UBY9 170 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 AGRNO00468 2067 aa7.72□□□□□ -1.17
SPTLC2-205ENST00000556607 EPPK1P58107 5090 aaKnown RBP7.71□□□□□ -1.17
SPTLC2-205ENST00000556607 PIGBOS1A0A0B4J2F0 54 aa7.71□□□□□ -1.18
SPTLC2-205ENST00000556607 IAPPP10997 89 aa7.71□□□□□ -1.18
SPTLC2-205ENST00000556607 PSG1P11464 419 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms