RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 OR1P1Q8NH06 330 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 REG4Q9BYZ8 158 aa14.17□□□□□ -0.14
PTPN21-208ENST00000556564 TRBV20OR9-2A0A075B6H5 130 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 Q8TCH9 128 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 OTORQ9NRC9 128 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 TNFRSF18Q9Y5U5 241 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 IGLV1-44P01699 117 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 SOD3P08294 240 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 UBE2E1P51965 193 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 SAMD13Q5VXD3 122 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 PRO1933Q9H354 126 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 RPL35AP18077 110 aaKnown RBP14.16□□□□□ -0.14
PTPN21-208ENST00000556564 QRFPP83859 136 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 SIGLEC9Q9Y336 463 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 SLC50A1Q9BRV3 221 aa14.16□□□□□ -0.14
PTPN21-208ENST00000556564 M0R3E3 92 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 NDUFS7O75251 213 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 WDR86Q86TI4 376 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 RNF5Q99942 180 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 PAX1P15863 534 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 ERVK11-1P61568 191 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 TRAF4Q9BUZ4 470 aaPredicted RBP14.15□□□□□ -0.14
PTPN21-208ENST00000556564 RPL13AP40429 203 aaKnown RBP14.15□□□□□ -0.14
PTPN21-208ENST00000556564 KIAA1644Q3SXP7 199 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 RTTNQ86VV8 2226 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 VAMP3Q15836 100 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 OR4D5Q8NGN0 318 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 RNF126Q9BV68 326 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 TRAV5A0A0B4J249 113 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 SHISA9B4DS77 424 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 PSMB2P49721 201 aa14.15□□□□□ -0.14
PTPN21-208ENST00000556564 SRSF9Q13242 221 aaKnown RBP eCLIP14.14□□□□□ -0.15
PTPN21-208ENST00000556564 GCSAMLQ5JQS6 135 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 FBLN7Q53RD9 439 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 DUSP14O95147 198 aaKnown RBP14.14□□□□□ -0.15
PTPN21-208ENST00000556564 ESPL1Q14674 2120 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 CNTFRP26992 372 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 DMRTC2Q8IXT2 367 aaPredicted RBP14.14□□□□□ -0.15
PTPN21-208ENST00000556564 TECTAO75443 2155 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 TRBV7-1A0A0A6YYK4 115 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 CFHR2P36980 270 aa14.14□□□□□ -0.15
PTPN21-208ENST00000556564 RSPO3Q9BXY4 272 aaPredicted RBP14.14□□□□□ -0.15
PTPN21-208ENST00000556564 FXYD7P58549 80 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 RNF114Q9Y508 228 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 CACNA1GO43497 2377 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 SLC17A3O00476 420 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 GATA4P43694 442 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 KIR2DL4Q99706 377 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 CDC42EP3Q9UKI2 254 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 RNF222A6NCQ9 220 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 NMUP48645 174 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 OR5AN1Q8NGI8 311 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 NRGNQ92686 78 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 TRBV6-6A0A0A6YYG2 114 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 IGKV1-16P04430 117 aa14.13□□□□□ -0.15
PTPN21-208ENST00000556564 HLA-DQA1P01909 254 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 ADORA2A-AS1P86434 159 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 ZNF506Q5JVG8 444 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 VN1R17PQ8TDU5 208 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 MIEN1Q9BRT3 115 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 MT-ND6P03923 174 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 TRGC2P03986 189 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 PSG1P11464 419 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 C1orf122Q6ZSJ8 110 aa14.12□□□□□ -0.15
PTPN21-208ENST00000556564 OBSL1O75147 1896 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 IGKV1-5P01602 117 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 SRIP30626 198 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 LRRK1Q38SD2 2015 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 DIDO1Q9BTC0 2240 aaKnown RBP14.11□□□□□ -0.15
PTPN21-208ENST00000556564 ID3Q02535 119 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 LY6G6FQ5SQ64 297 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 FAM223BA6NKX1 122 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 FAM223AQ8IWN6 122 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 TMEM101Q96IK0 257 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 SCRT1Q9BWW7 348 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 ZNF407Q9C0G0 2248 aa14.11□□□□□ -0.15
PTPN21-208ENST00000556564 SNRNP200O75643 2136 aaKnown RBP14.1□□□□□ -0.15
PTPN21-208ENST00000556564 WFDC1Q9HC57 220 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 DEFB113Q30KQ7 82 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 LHFPL1Q86WI0 220 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 BEND2Q8NDZ0 799 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 H7C1H1 209 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 HBBP68871 147 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 INTS1Q8N201 2190 aaKnown RBP14.1□□□□□ -0.15
PTPN21-208ENST00000556564 PUSL1Q8N0Z8 303 aaKnown RBP14.1□□□□□ -0.15
PTPN21-208ENST00000556564 BIVMQ86UB2 503 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 USMG5Q96IX5 58 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 RPP21Q9H633 154 aaKnown RBP14.1□□□□□ -0.15
PTPN21-208ENST00000556564 ZFP30Q9Y2G7 519 aa14.1□□□□□ -0.15
PTPN21-208ENST00000556564 F11RQ9Y624 299 aaKnown RBP14.1□□□□□ -0.15
PTPN21-208ENST00000556564 ATP6V0E1O15342 81 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 LOXP28300 417 aaPredicted RBP14.09□□□□□ -0.15
PTPN21-208ENST00000556564 ASCL4Q6XD76 172 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 PEF1Q9UBV8 284 aaKnown RBP14.09□□□□□ -0.15
PTPN21-208ENST00000556564 A0A1B0GWJ7 208 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 ACTL10Q5JWF8 245 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 FER1L6-AS1Q8NA97 138 aa14.09□□□□□ -0.15
PTPN21-208ENST00000556564 IGKV2-40A0A087WW87 121 aaPredicted RBP14.09□□□□□ -0.15
PTPN21-208ENST00000556564 IGKV2D-40P01614 121 aaPredicted RBP14.09□□□□□ -0.15
PTPN21-208ENST00000556564 SYNJ2BPP57105 145 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms