RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 CSTL1Q9H114 145 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 MCUBQ9NWR8 336 aa9.32□□□□□ -0.92
SNX6-207ENST00000556303 IGHV3-49A0A0A0MS15 119 aa9.31□□□□□ -0.92
SNX6-207ENST00000556303 DNASE2O00115 360 aaPredicted RBP9.31□□□□□ -0.92
SNX6-207ENST00000556303 IGKV1-17P01599 117 aa9.31□□□□□ -0.92
SNX6-207ENST00000556303 EIF2B2P49770 351 aaKnown RBP9.31□□□□□ -0.92
SNX6-207ENST00000556303 SMCO1Q147U7 214 aa9.31□□□□□ -0.92
SNX6-207ENST00000556303 SLC25A21Q9BQT8 299 aaPredicted RBP9.31□□□□□ -0.92
SNX6-207ENST00000556303 MS4A6AQ9H2W1 248 aa9.31□□□□□ -0.92
SNX6-207ENST00000556303 MPTX1A8MV57 137 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 ZNF701M0R085 212 aaPredicted RBP9.3□□□□□ -0.92
SNX6-207ENST00000556303 APOHP02749 345 aaPredicted RBP9.3□□□□□ -0.92
SNX6-207ENST00000556303 IGLC1P0CG04 106 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 NPY1RP25929 384 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 S100A5P33763 92 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 AP2S1P53680 142 aaPredicted RBP9.3□□□□□ -0.92
SNX6-207ENST00000556303 SUPT4H1P63272 117 aaKnown RBP9.3□□□□□ -0.92
SNX6-207ENST00000556303 KLF9Q13886 244 aaPredicted RBP9.3□□□□□ -0.92
SNX6-207ENST00000556303 MLANAQ16655 118 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 DEFB135Q30KP9 77 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 TMEM128Q5BJH2 165 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 PRSS54Q6PEW0 395 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 APRG1Q8IVJ8 170 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 TOMM5Q8N4H5 51 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 Q8WTZ3 238 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 GRAMD2BQ96HH9 432 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 MRPL36Q9P0J6 103 aaKnown RBP9.3□□□□□ -0.92
SNX6-207ENST00000556303 HSPB7Q9UBY9 170 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 U3KQE9 123 aa9.3□□□□□ -0.92
SNX6-207ENST00000556303 IGHV3OR16-13A0A075B7E8 117 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 IGHV3-74A0A0B4J1X5 117 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 SLC25A6P12236 298 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 AKR1C4P17516 323 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 RPL35AP18077 110 aaKnown RBP9.29□□□□□ -0.92
SNX6-207ENST00000556303 OR10J1P30954 320 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 TFPI2P48307 235 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 RPL11P62913 178 aaKnown RBP9.29□□□□□ -0.92
SNX6-207ENST00000556303 PYDC2Q56P42 97 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 TMEM41BQ5BJD5 291 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 LYG2Q86SG7 212 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 LILRB2Q8N423 598 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 GBGT1Q8N5D6 347 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 LRTM2Q8N967 370 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 TRIM63Q969Q1 353 aa9.29□□□□□ -0.92
SNX6-207ENST00000556303 IGKV3-7A0A075B6H7 116 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 A0A0J9YWU9 116 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 HELTA6NFD8 242 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 IFNA10P01566 189 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 HNRNPCP07910 306 aaKnown RBP eCLIP9.28□□□□□ -0.927e-12■■■□□ 16.5
SNX6-207ENST00000556303 GPX4P36969 197 aaPredicted RBP9.28□□□□□ -0.92
SNX6-207ENST00000556303 P2RY1P47900 373 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 RND2P52198 227 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 TIGITQ495A1 244 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 LYZL2Q7Z4W2 148 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 DTD1Q8TEA8 209 aa9.28□□□□□ -0.92
SNX6-207ENST00000556303 SEPSECSQ9HD40 501 aaKnown RBP9.28□□□□□ -0.92
SNX6-207ENST00000556303 NUPR2A6NF83 97 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 CCDC160A6NGH7 325 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 FAM90A26D6RGX4 464 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 K7EQG2 157 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 NUP62P37198 522 aaPredicted RBP9.27□□□□□ -0.93
SNX6-207ENST00000556303 DEFB131AP59861 70 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 CCDC190Q86UF4 302 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 TMEM170AQ8WVE7 144 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 NPIPB3Q92617 1050 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 PFDN2Q9UHV9 154 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 RABAC1Q9UI14 185 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 V9GYH0 126 aa9.27□□□□□ -0.93
SNX6-207ENST00000556303 KMT2AQ03164 3969 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 IGHV3-66A0A0C4DH42 116 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 PITX3O75364 302 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 MED6O75586 246 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 TOMM40O96008 361 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 RD3LP0DJH9 198 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 UBE2MP61081 183 aaKnown RBP9.26□□□□□ -0.93
SNX6-207ENST00000556303 ZNF79Q15937 498 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 SPANXN2Q5MJ10 180 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 C16orf54Q6UWD8 224 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 STHQ8IWL8 128 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 OR1S1Q8NH92 325 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 DCANP1Q8TF63 244 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 RARRES2Q99969 163 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 RBKSQ9H477 322 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 TMED3Q9Y3Q3 217 aa9.26□□□□□ -0.93
SNX6-207ENST00000556303 IFNA4P05014 189 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 IL4P05112 153 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 FABP1P07148 127 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 SPP1P10451 314 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 RAB11AP62491 216 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 RPP30P78346 268 aaKnown RBP9.25□□□□□ -0.93
SNX6-207ENST00000556303 RBMS2Q15434 407 aaKnown RBP9.25□□□□□ -0.93
SNX6-207ENST00000556303 ZNF124Q15973 351 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 MORN3Q6PF18 240 aaPredicted RBP9.25□□□□□ -0.93
SNX6-207ENST00000556303 TMED4Q7Z7H5 227 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 STXBP6Q8NFX7 210 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 GLMPQ8WWB7 406 aa9.25□□□□□ -0.93
SNX6-207ENST00000556303 CIB3Q96Q77 187 aaPredicted RBP9.25□□□□□ -0.93
SNX6-207ENST00000556303 RBM38Q9H0Z9 239 aaKnown RBP9.25□□□□□ -0.93
SNX6-207ENST00000556303 C11orf68Q9H3H3 251 aaKnown RBP9.25□□□□□ -0.93
SNX6-207ENST00000556303 PRR13Q9NZ81 148 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms