RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 NMSQ5H8A3 153 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 ETFRF1Q6IPR1 90 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 FAAP20Q6NZ36 180 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 SLC24A4Q8NFF2 622 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 OR4C16Q8NGL9 310 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 OR1S2Q8NGQ3 325 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 OR11H2Q8NH07 326 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 DCANP1Q8TF63 244 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 TMEM230Q96A57 120 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 SCGB3A2Q96PL1 93 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 HEYLQ9NQ87 328 aaPredicted RBP9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 CACNG5Q9UF02 275 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 KCNIP3Q9Y2W7 256 aa9.29□□□□□ -0.92
HNRNPC-221ENST00000555883 KMT2AQ03164 3969 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 ANKRD20A5PA0PJZ0 165 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 HELTA6NFD8 242 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 SPP1P10451 314 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 AP2S1P53680 142 aaPredicted RBP9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 TCTAP57738 103 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 IL18Q14116 193 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 MLANAQ16655 118 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 TMEM268Q5VZI3 342 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 LGALS9CQ6DKI2 356 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 PRSS54Q6PEW0 395 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 MORN3Q6PF18 240 aaPredicted RBP9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 TRPT1Q86TN4 253 aaKnown RBP9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 STHQ8IWL8 128 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 FAM24BQ8N5W8 94 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 C11orf45Q8TAV5 145 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 DYNC2LI1Q8TCX1 351 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 Q8WTZ3 238 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 GPR146Q96CH1 333 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 DIRAS2Q96HU8 199 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 HRH4Q9H3N8 390 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 SEPSECSQ9HD40 501 aaKnown RBP9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 RSL24D1Q9UHA3 163 aaKnown RBP9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 RABAC1Q9UI14 185 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 SCP2D1Q9UJQ7 156 aa9.28□□□□□ -0.92
HNRNPC-221ENST00000555883 IGHV3-66A0A0C4DH42 116 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 SULT1A3P0DMM9 295 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 SULT1A4P0DMN0 295 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 OR10J1P30954 320 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 ATP5IP56385 69 aaPredicted RBP9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 TIGITQ495A1 244 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 LEMD1Q68G75 181 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 OR51S1Q8NGJ8 323 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 U3KQ87 197 aa9.27□□□□□ -0.93
HNRNPC-221ENST00000555883 A0A0B4J2A0 478 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 CEBPZOSA8MTT3 80 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 HNRNPCP07910 306 aaKnown RBP eCLIP9.26□□□□□ -0.933e-7■■□□□ 12.3
HNRNPC-221ENST00000555883 NPY1RP25929 384 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 CCR6P51684 374 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 RND2P52198 227 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 SRPXP78539 464 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 RBMS2Q15434 407 aaKnown RBP9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 C16orf54Q6UWD8 224 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 CLVS1Q8IUQ0 354 aaPredicted RBP9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 STXBP6Q8NFX7 210 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 TMEM170AQ8WVE7 144 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 GLMPQ8WWB7 406 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 SOSTQ9BQB4 213 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 HSPB7Q9UBY9 170 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 SHPKQ9UHJ6 478 aa9.26□□□□□ -0.93
HNRNPC-221ENST00000555883 ZNF705EA8MWA4 302 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 C11orf94C9JXX5 98 aa9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 TOMM40O96008 361 aa9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 IFNA4P05014 189 aa9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 GIG44P09565 113 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 MIFP14174 115 aa9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 NUP62P37198 522 aaPredicted RBP9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 Q8NAQ8 132 aa9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 SLIRPQ9GZT3 109 aaKnown RBP9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 FRAS1Q86XX4 4008 aa9.25□□□□□ -0.93
HNRNPC-221ENST00000555883 DUXBA0A1W2PPF3 345 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 IL4P05112 153 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 ZNF688P0C7X2 276 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 ANXA3P12429 323 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 NANOS2P60321 138 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 SUPT4H1P63272 117 aaKnown RBP9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 SMCO1Q147U7 214 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 DEDD2Q8WXF8 326 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 NPIPB3Q92617 1050 aa9.24□□□□□ -0.93
HNRNPC-221ENST00000555883 BUB3O43684 328 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 RD3LP0DJH9 198 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 FAUP35544 74 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 SNRPD3P62318 126 aaKnown RBP9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 DHRS2Q13268 280 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 USF2Q15853 346 aaPredicted RBP9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 OR8G2PQ6IF36 304 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 LGI3Q8N145 548 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 CSNK1G2-AS1Q8NCQ2 148 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 DTD1Q8TEA8 209 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 C2CD4CQ8TF44 421 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 NRN1Q9NPD7 142 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 PFDN2Q9UHV9 154 aa9.23□□□□□ -0.93
HNRNPC-221ENST00000555883 FABP12A6NFH5 140 aa9.22□□□□□ -0.93
HNRNPC-221ENST00000555883 FAM90A26D6RGX4 464 aa9.22□□□□□ -0.93
HNRNPC-221ENST00000555883 NOL3O60936 208 aaKnown RBP9.22□□□□□ -0.93
HNRNPC-221ENST00000555883 NXPH3O95157 252 aa9.22□□□□□ -0.93
HNRNPC-221ENST00000555883 IFNA10P01566 189 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms