RNA–Protein interactions for RNA: ENST00000555746.5

SRP54-209, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 558 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-209ENST00000555746 ZNF708P17019 499 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 RPL7P18124 248 aaKnown RBP2.23□□□□□ -2.05
SRP54-209ENST00000555746 CXCL3P19876 107 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 RPS3P23396 243 aaKnown RBP eCLIP2.23□□□□□ -2.058e-6■■□□□ 12.6
SRP54-209ENST00000555746 CNTFRP26992 372 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 AGTR1P30556 359 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 BRS3P32247 399 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 ETV6P41212 452 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 MARCKSL1P49006 195 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 RHOGP84095 191 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 MXD1Q05195 221 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 FABP9Q0Z7S8 132 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 DAZ2Q13117 558 aaKnown RBP2.23□□□□□ -2.05
SRP54-209ENST00000555746 FZD2Q14332 565 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 PYY3Q5JQD4 70 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR2T5Q6IEZ7 315 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 FBXW12Q6X9E4 464 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 Q6ZVH6 145 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 TCTE3Q8IZS6 198 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 C3orf56Q8N813 242 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR4M1Q8NGD0 313 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR52E2Q8NGJ4 325 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR1N2Q8NGR9 330 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR2A1Q8NGT9 310 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR2T29Q8NH02 315 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 JOSD2Q8TAC2 188 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 BLNKQ8WV28 456 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 PLEKHB2Q96CS7 222 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 BTN2A3PQ96KV6 586 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR2M4Q96R27 311 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR52B2Q96RD2 323 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 TRIB3Q96RU7 358 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 LYSMD1Q96S90 227 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 MGLLQ99685 303 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 RARRES2Q99969 163 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 MRPL57Q9BQC6 102 aaKnown RBP2.23□□□□□ -2.05
SRP54-209ENST00000555746 NRIP2Q9BQI9 281 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 SAMD10Q9BYL1 202 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 OR2H1Q9GZK4 316 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 CHST6Q9GZX3 395 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 RNASE7Q9H1E1 156 aaKnown RBP2.23□□□□□ -2.05
SRP54-209ENST00000555746 DAZ3Q9NR90 486 aaKnown RBP2.23□□□□□ -2.05
SRP54-209ENST00000555746 DMAC2Q9NW81 257 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 KCNIP1Q9NZI2 227 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 MRPL27Q9P0M9 148 aaKnown RBP2.23□□□□□ -2.05
SRP54-209ENST00000555746 NAT8Q9UHE5 227 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 RFNGQ9Y644 331 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 DSCAMO60469 2012 aa2.23□□□□□ -2.05
SRP54-209ENST00000555746 MALRD1Q5VYJ5 2156 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 IGLV3-22A0A075B6J6 115 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 LOC102724200A0A096LPH7 203 aaPredicted RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 TRAV8-4A0A0B4J246 113 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 DUXBA0A1W2PPF3 345 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PINLYPA6NC86 204 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SIGLEC16A6NMB1 481 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 NCBP2LA6PVI3 153 aaKnown RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 C9JAW5 83 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 F6UB75 175 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 NPIPB7O75200 414 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 REM1O75628 298 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 UPK1BO75841 260 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SNAPC5O75971 98 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PTHP01270 115 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 P01737 135 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SERPINE1P05121 402 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 HLA-DQB2P05538 268 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 CSN2P05814 226 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 CD2P06729 351 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 LGALS1P09382 135 aaKnown RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 OR4A8P0C604 315 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 RBMY1CP0DJD4 496 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 SPTBP11277 2137 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 CXCL2P19875 107 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ATP6V0CP27449 155 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 GABRA3P34903 492 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 CA7P43166 264 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 KLK7P49862 253 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 LHX2P50458 406 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 GPM6AP51674 278 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 POLR2HP52434 150 aaKnown RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 SLC18A1P54219 525 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 H2BFSP57053 126 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 KRTAP12-2P59991 146 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 HBG1P69891 147 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 HBG2P69892 147 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PSG9Q00887 426 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 CAV1Q03135 178 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 MEF2CQ06413 473 aaPredicted RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 PRDX1Q06830 199 aaKnown RBP2.22□□□□□ -2.05
SRP54-209ENST00000555746 INCA1Q0VD86 236 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PRDX4Q13162 271 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 IHHQ14623 411 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 OR7A5Q15622 319 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ZNF726P1Q15940 193 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ZNF181Q2M3W8 571 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 ZNF404Q494X3 552 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 TMEM255AQ5JRV8 349 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 C1orf100Q5SVJ3 147 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 GLT8D1Q68CQ7 371 aa2.22□□□□□ -2.05
SRP54-209ENST00000555746 PRSS54Q6PEW0 395 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms