RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 C22orf15Q8WYQ4 148 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 FNDC4Q9H6D8 234 aaPredicted RBP13.05□□□□□ -0.32
TUBB3-209ENST00000555609 NRN1Q9NPD7 142 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 TBL2Q9Y4P3 447 aaKnown RBP13.05□□□□□ -0.32
TUBB3-209ENST00000555609 DYSFO75923 2080 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 LAMA5O15230 3695 aa13.05□□□□□ -0.32
TUBB3-209ENST00000555609 PRRG2O14669 202 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 CA7P43166 264 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 AMTP48728 403 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 DLX6P56179 175 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 KLF5Q13887 457 aaPredicted RBP13.04□□□□□ -0.32
TUBB3-209ENST00000555609 FAM162BQ5T6X4 162 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 ARL6IP6Q8N6S5 226 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 FBXL7Q9UJT9 491 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 CBY1Q9Y3M2 126 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 KLF12Q9Y4X4 402 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 DIRC3C9JPN6 131 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 E7EUB6 86 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 F2Z2F3 143 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 CORTO00230 105 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 SRIP30626 198 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 CDKN1AP38936 164 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 MORN5Q5VZ52 161 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 TSKUQ8WUA8 353 aa13.04□□□□□ -0.32
TUBB3-209ENST00000555609 URB1O60287 2271 aaKnown RBP13.03□□□□□ -0.32
TUBB3-209ENST00000555609 IGF2RP11717 2491 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 OR2J3O76001 311 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 PRRX1P54821 245 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 TCL1AP56279 114 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 TMEM155Q4W5P6 130 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 MRPL54Q6P161 138 aaKnown RBP13.03□□□□□ -0.32
TUBB3-209ENST00000555609 WFDC8Q8IUA0 241 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 NUDT10Q8NFP7 164 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 H1FXQ92522 213 aaKnown RBP13.03□□□□□ -0.32
TUBB3-209ENST00000555609 NUDT11Q96G61 164 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 JKAMPQ9P055 326 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 EPDR1Q9UM22 224 aa13.03□□□□□ -0.32
TUBB3-209ENST00000555609 SOX21Q9Y651 276 aaPredicted RBP13.03□□□□□ -0.32
TUBB3-209ENST00000555609 ZFHX4Q86UP3 3567 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 RPLP1P05386 114 aaKnown RBP13.02□□□□□ -0.32
TUBB3-209ENST00000555609 COL8A2P25067 703 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 PLP1P60201 277 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 KRTDAPP60985 99 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 CT83Q5H943 113 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 LINC00305Q7Z4B0 112 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 Q8N976 141 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 SCNM1Q9BWG6 230 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 NGBQ9NPG2 151 aa13.02□□□□□ -0.32
TUBB3-209ENST00000555609 A0A0G2JNJ9 132 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 SPINK4O60575 86 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 PYYP10082 97 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 UBE2G1P62253 170 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 BSPH1Q075Z2 132 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 TMEM116Q8NCL8 245 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 TNFRSF19Q9NS68 423 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 Q9UFV3 132 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 PAM16Q9Y3D7 125 aa13.02□□□□□ -0.33
TUBB3-209ENST00000555609 A0A1W2PPI3 338 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 FCN3O75636 299 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 CD33P20138 364 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 LOXP28300 417 aaPredicted RBP13.01□□□□□ -0.33
TUBB3-209ENST00000555609 REG1BP48304 166 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 SSBP2P81877 361 aaPredicted RBP13.01□□□□□ -0.33
TUBB3-209ENST00000555609 KIAA1644Q3SXP7 199 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 CYB5R2Q6BCY4 276 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 NUP35Q8NFH5 326 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 BORCS7Q96B45 105 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 FAM103A1Q9BTL3 118 aaKnown RBP13.01□□□□□ -0.33
TUBB3-209ENST00000555609 C7orf69Q9H7B7 122 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 ZNF492Q9P255 531 aa13.01□□□□□ -0.33
TUBB3-209ENST00000555609 THBDP07204 575 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 IGHV1-8P0DP01 117 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 CTRLP40313 264 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 PMCHL1Q16048 86 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 TDRG1Q3Y452 100 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 KLHDC1Q8N7A1 406 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 C18orf32Q8TCD1 76 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 FMC1Q96HJ9 113 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 GPR82Q96P67 336 aa13□□□□□ -0.33
TUBB3-209ENST00000555609 IGLC7A0M8Q6 106 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 SLC25A17O43808 307 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 HYPMO75409 117 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 CRYGBP07316 175 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 RPL27AP46776 148 aaKnown RBP12.99□□□□□ -0.33
TUBB3-209ENST00000555609 MFAP2P55001 183 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 SLC35B1P78383 322 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 GAGE1Q13065 139 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 MRGPRG-AS1Q2M3A8 158 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 NIT1Q86X76 327 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 CCL17Q92583 94 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 RNASE6Q93091 150 aaKnown RBP12.99□□□□□ -0.33
TUBB3-209ENST00000555609 TMEM133Q9H2Q1 129 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 C20orf202A1L168 122 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 TOMM40O96008 361 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 SLC25A5P05141 298 aaKnown RBP12.99□□□□□ -0.33
TUBB3-209ENST00000555609 CASP6P55212 293 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 SPACA3Q8IXA5 215 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 C5orf17Q8NAS9 161 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 FAM168AQ92567 244 aa12.99□□□□□ -0.33
TUBB3-209ENST00000555609 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms