RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 IGLC1P0CG04 106 aa10.95□□□□□ -0.66
CHD8-208ENST00000555301 CD33P20138 364 aa10.95□□□□□ -0.66
CHD8-208ENST00000555301 OR10J1P30954 320 aa10.95□□□□□ -0.66
CHD8-208ENST00000555301 S100A11P31949 105 aa10.95□□□□□ -0.66
CHD8-208ENST00000555301 SYNJ2BPP57105 145 aa10.95□□□□□ -0.66
CHD8-208ENST00000555301 DLX4Q92988 240 aaPredicted RBP10.95□□□□□ -0.66
CHD8-208ENST00000555301 ZFP92A6NM28 416 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 LGALS9O00182 355 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 NDUFA4O00483 81 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 EWSR1Q01844 656 aaKnown RBP eCLIP10.94□□□□□ -0.66
CHD8-208ENST00000555301 AKR1C1Q04828 323 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 SLC38A11Q08AI6 406 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 ARL16Q0P5N6 197 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 ATP6V1FQ16864 119 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 TREML4Q6UXN2 200 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 ZNF600Q6ZNG1 722 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 TMEM144Q7Z5S9 345 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 HAPLN4Q86UW8 402 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 LILRB2Q8N423 598 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 TMEM217Q8N7C4 229 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 MCRIP2Q9BUT9 160 aaKnown RBP10.94□□□□□ -0.66
CHD8-208ENST00000555301 NPVFQ9HCQ7 196 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 PEMTQ9UBM1 199 aa10.94□□□□□ -0.66
CHD8-208ENST00000555301 hCG_2014768A0A024R1R8 64 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 IGHV3-35A0A0C4DH35 117 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 ZNF320A2RRD8 509 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 SMCO3A2RU48 225 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 IGKV1-17P01599 117 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 FABP1P07148 127 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 RPL12P30050 165 aaKnown RBP10.93□□□□□ -0.66
CHD8-208ENST00000555301 NUP62P37198 522 aaPredicted RBP10.93□□□□□ -0.66
CHD8-208ENST00000555301 YPEL3P61236 119 aaPredicted RBP10.93□□□□□ -0.66
CHD8-208ENST00000555301 Q5BKY6 102 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 REC114Q7Z4M0 266 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 THAP8Q8NA92 274 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 OR9G4Q8NGQ1 327 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 RCC1LQ96I51 464 aaKnown RBP10.93□□□□□ -0.66
CHD8-208ENST00000555301 ELOVL1Q9BW60 279 aa10.93□□□□□ -0.66
CHD8-208ENST00000555301 YIF1AO95070 293 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 NHLH2Q02577 135 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 TIGITQ495A1 244 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 Q8WTZ3 238 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 TRGV9Q99603 122 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 TMEM147Q9BVK8 224 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 UQCC1Q9NVA1 299 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 UFC1Q9Y3C8 167 aa10.92□□□□□ -0.66
CHD8-208ENST00000555301 A8MWP6 167 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 RD3LP0DJH9 198 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 ELLP55199 621 aaPredicted RBP10.91□□□□□ -0.66
CHD8-208ENST00000555301 VWC2Q2TAL6 325 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 TEPPQ6URK8 271 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 ZNF546Q86UE3 836 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 INO80EQ8NBZ0 244 aaPredicted RBP10.91□□□□□ -0.66
CHD8-208ENST00000555301 OR5C1Q8NGR4 320 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 GPR61Q9BZJ8 451 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 HSPB11Q9Y547 144 aa10.91□□□□□ -0.66
CHD8-208ENST00000555301 PUS1Q9Y606 427 aaKnown RBP eCLIP10.91□□□□□ -0.66
CHD8-208ENST00000555301 IGKV1D-37A0A075B6S9 117 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 IGKV1OR2-108A0A075B7D4 117 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 FXYD6-FXYD2A0A087WZ82 144 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 G3V3Q6 166 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 K7EMT4 169 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 TOMM40O96008 361 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 CFDP00746 253 aaPredicted RBP10.9□□□□□ -0.66
CHD8-208ENST00000555301 TOMM20LQ6UXN7 152 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 UNQ9165/PRO28630Q6UXU0 137 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 AQP10Q96PS8 301 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 GINS3Q9BRX5 216 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 C20orf24Q9BUV8 137 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 DAZ1Q9NQZ3 744 aaKnown RBP10.9□□□□□ -0.66
CHD8-208ENST00000555301 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
CHD8-208ENST00000555301 A0A1B0GVG6 124 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 DFFBO76075 338 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 PSG1P11464 419 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 INSL3P51460 131 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 SELENOTP62341 195 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 ZNF90Q03938 601 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 RAB31Q13636 194 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 C9orf66Q5T8R8 295 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 AKAP14Q86UN6 197 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 OR51G1Q8NGK1 321 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 MARC2Q969Z3 335 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 ZNF414Q96IQ9 312 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 ST6GAL2Q96JF0 529 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 SIGLEC8Q9NYZ4 499 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 TNFSF18Q9UNG2 199 aa10.89□□□□□ -0.67
CHD8-208ENST00000555301 LSM4Q9Y4Z0 139 aaKnown RBP10.89□□□□□ -0.67
CHD8-208ENST00000555301 C2orf70A6NJV1 201 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 MPDU1O75352 247 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 SAP30O75446 220 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 IGLL1P15814 213 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 CLINT1Q14677 625 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 CYP2G1PQ6ZSU1 146 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 TCTE3Q8IZS6 198 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 ATP5SQ99766 215 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 ZFAND3Q9H8U3 227 aa10.88□□□□□ -0.67
CHD8-208ENST00000555301 MRPL27Q9P0M9 148 aaKnown RBP10.88□□□□□ -0.67
CHD8-208ENST00000555301 WDR83OSQ9Y284 106 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms