RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 IGHV3OR15-7A0A075B7D8 119 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 KBTBD11-OT1A0A1B0GTJ5 212 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 PSMB11A5LHX3 300 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 SPRY3O43610 288 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 LIPFP07098 398 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 ARF6P62330 175 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 HBBP68871 147 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 LDLRAD2Q5SZI1 272 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 ETFRF1Q6IPR1 90 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 PRR27Q6MZM9 219 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 OR1L4Q8NGR5 311 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 GFRA4Q9GZZ7 299 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 SCRT2Q9NQ03 307 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 IDI2-AS1Q9NZ38 188 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 WASHC3Q9Y3C0 194 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 AMMECR1Q9Y4X0 333 aaPredicted RBP8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 FAM215AQ9Y5M1 114 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 OR51B2Q9Y5P1 312 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 RIF1Q5UIP0 2472 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 FAM231BA6NCW3 169 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 PEX7O00628 323 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 TM4SF5O14894 197 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 NUDT3O95989 172 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 RPL8P62917 257 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 UBE2L3P68036 154 aaKnown RBP8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 C17orf58Q2M2W7 97 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 GDF5OSQ5U4N7 250 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 VKORC1L1Q8N0U8 176 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 ZNRF1Q8ND25 227 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 DPF1Q92782 380 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 FAM167A-AS1Q96KT0 104 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 C7orf69Q9H7B7 122 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 ZNF355PQ9NSJ1 428 aa8.68□□□□□ -1.02
MTHFD1-210ENST00000555252 INS-IGF2F8WCM5 200 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 LEPROTL1O95214 131 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 ZNF134P52741 427 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 SEC11AP67812 179 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 TNFAIP6P98066 277 aaPredicted RBP8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 NHLH1Q02575 133 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 CD69Q07108 199 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 RPL39P5Q59GN2 51 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 TMEM190Q8WZ59 177 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 FAM168AQ92567 244 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 URB1-AS1Q96HZ7 61 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 SLC25A2Q9BXI2 301 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 LINC00574Q9H8X3 128 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 ZNF492Q9P255 531 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 CACNA1GO43497 2377 aa8.67□□□□□ -1.02
MTHFD1-210ENST00000555252 IGKV1OR2-108A0A075B7D4 117 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 HIGD1CA8MV81 97 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 A8MWL6 223 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 BPIFB3P59826 476 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 TCF24Q7RTU0 167 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 ZNF329Q86UD4 541 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 NUP37Q8NFH4 326 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 STXBP6Q8NFX7 210 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 OR2T6Q8NHC8 308 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 FAM57AQ8TBR7 257 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 NDFIP1Q9BT67 221 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 SSBP3Q9BWW4 388 aaPredicted RBP8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 MAP1LC3CQ9BXW4 147 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 HSPB8Q9UJY1 196 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 GVINP1Q7Z2Y8 2422 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 IGHV1-24A0A0C4DH33 117 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 M0QZ24 198 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 UPK2O00526 184 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 CA1P00915 261 aaPredicted RBP8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 PSG1P11464 419 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 CT45A1Q5HYN5 189 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 ALKBH2Q6NS38 261 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 VHLLQ6RSH7 139 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 SSX8Q7RTT4 187 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 CT45A3Q8NHU0 189 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 KLF12Q9Y4X4 402 aa8.66□□□□□ -1.02
MTHFD1-210ENST00000555252 CBY3A6NI87 242 aa8.65□□□□□ -1.02
MTHFD1-210ENST00000555252 IGHV1-46P01743 117 aa8.65□□□□□ -1.02
MTHFD1-210ENST00000555252 CEACAM3P40198 252 aa8.65□□□□□ -1.02
MTHFD1-210ENST00000555252 SPATA12Q7Z6I5 190 aa8.65□□□□□ -1.02
MTHFD1-210ENST00000555252 PAXXQ9BUH6 204 aa8.65□□□□□ -1.02
MTHFD1-210ENST00000555252 MUC21A0A0G2JKD1 596 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 MUC21A0A140T8X8 626 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 GAGE12BA1L429 117 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 OR2T8A6NH00 312 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 CD40P25942 277 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 MYCNOSP40205 109 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 NBL1P41271 181 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 SPRNQ5BIV9 151 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 MUC21Q5SSG8 566 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 TEX36Q5VZQ5 186 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 AMMECR1LQ6DCA0 310 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 ZNF788Q6ZQV5 615 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 GTF2H5Q6ZYL4 71 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 H1FXQ92522 213 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 PLPPR2Q96GM1 343 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 GAFA1Q96PS6 74 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 PRSS22Q9GZN4 317 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 RPP21Q9H633 154 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 CLEC5AQ9NY25 188 aa8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 CHTOPQ9Y3Y2 248 aaKnown RBP8.65□□□□□ -1.03
MTHFD1-210ENST00000555252 IGLC1P0CG04 106 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms