RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 TRAV8-1A0A0A6YYK1 113 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 TRGV8A0A0C4DH27 118 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 A0A1B0GWJ7 208 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 LY6HO94772 140 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 IGHG3P01860 377 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
XRCC3-208ENST00000554811 MMDQ15546 238 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 LRRC10Q5BKY1 277 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 TMEM144Q7Z5S9 345 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 PDPNQ86YL7 162 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 ASCL3Q9NQ33 180 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 ISLRO14498 428 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 AARDQ4LEZ3 155 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 PPIAL4EA0A075B759 164 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 PPIAL4DF5H284 164 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 PPIAL4FP0DN26 164 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 CLEC5AQ9NY25 188 aa9.66□□□□□ -0.86
XRCC3-208ENST00000554811 FAM90A27PA6NNH2 459 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 VSTM5A8MXK1 200 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 VWC2Q2TAL6 325 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 C1orf162Q8NEQ5 155 aaPredicted RBP9.65□□□□□ -0.86
XRCC3-208ENST00000554811 TNFRSF19Q9NS68 423 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 RPLP1P05386 114 aaKnown RBP9.65□□□□□ -0.86
XRCC3-208ENST00000554811 CNTFRP26992 372 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 SUB1P53999 127 aaKnown RBP eCLIP9.65□□□□□ -0.86
XRCC3-208ENST00000554811 PRCDQ00LT1 54 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 ZNF430Q9H8G1 570 aaPredicted RBP9.65□□□□□ -0.86
XRCC3-208ENST00000554811 TMEM14BQ9NUH8 114 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 RPUSD1Q9UJJ7 312 aaKnown RBP9.65□□□□□ -0.86
XRCC3-208ENST00000554811 HILPDAQ9Y5L2 63 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 FAM215AQ9Y5M1 114 aa9.65□□□□□ -0.86
XRCC3-208ENST00000554811 ZNF891A8MT65 544 aaPredicted RBP9.64□□□□□ -0.87
XRCC3-208ENST00000554811 C16orf97H3BN30 126 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 TCF21O43680 179 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 NUTF2P61970 127 aaKnown RBP9.64□□□□□ -0.87
XRCC3-208ENST00000554811 RAB1CQ92928 201 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 NEU1Q99519 415 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 RNF114Q9Y508 228 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 COL12A1Q99715 3063 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 F2RL2O00254 374 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 RAB4AP20338 218 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 ZNF138P52744 262 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 PRNTQ86SH4 94 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
XRCC3-208ENST00000554811 SLC25A33Q9BSK2 321 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 ONECUT1Q9UBC0 465 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 FOXA2Q9Y261 457 aaPredicted RBP9.64□□□□□ -0.87
XRCC3-208ENST00000554811 V9GYV3 84 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 HIGD1CA8MV81 97 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 DLL1O00548 723 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 CHEK1O14757 476 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 TYMSP04818 313 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 FAM87AP0C7U9 286 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 CD69Q07108 199 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 VMA21Q3ZAQ7 101 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 PLA2G2CQ5R387 149 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 C1orf159Q96HA4 380 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 CDC42EP3Q9UKI2 254 aa9.64□□□□□ -0.87
XRCC3-208ENST00000554811 IGLV1-44P01699 117 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 RNASE2P10153 161 aaKnown RBP9.63□□□□□ -0.87
XRCC3-208ENST00000554811 CD99P14209 185 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 AREGP15514 252 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 C1orf194Q5T5A4 169 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 DMRTA1Q5VZB9 504 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 C11orf42Q8N5U0 333 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 OR52E5Q8NH55 327 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 FAM222BQ8WU58 562 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 RITA1Q96K30 269 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 MRPL36Q9P0J6 103 aaKnown RBP9.63□□□□□ -0.87
XRCC3-208ENST00000554811 TP73-AS1Q9UF72 201 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 LSM4Q9Y4Z0 139 aaKnown RBP9.63□□□□□ -0.87
XRCC3-208ENST00000554811 ZNF292O60281 2723 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 TLN2Q9Y4G6 2542 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 SERTM2A0A1B0GWG4 89 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 SNAI2O43623 268 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 PAFAH1B2P68402 229 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 SLAQ13239 276 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 TMEM200BQ69YZ2 307 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 FBXL15Q9H469 300 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 SPENQ96T58 3664 aaKnown RBP9.63□□□□□ -0.87
XRCC3-208ENST00000554811 WT1-ASQ06250 92 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 TMEM177Q53S58 311 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 WDR73Q6P4I2 378 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 OR8B2Q96RD0 313 aa9.63□□□□□ -0.87
XRCC3-208ENST00000554811 MKRN2OSH3BPM6 223 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 IGHV3-23P01764 117 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 AMY1AP04745 511 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 PRR30Q53SZ7 412 aaPredicted RBP9.62□□□□□ -0.87
XRCC3-208ENST00000554811 OR1L4Q8NGR5 311 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 C2orf88Q9BSF0 95 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 FNDC4Q9H6D8 234 aaPredicted RBP9.62□□□□□ -0.87
XRCC3-208ENST00000554811 TP53TG3Q9ULZ0 132 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 INSIG2Q9Y5U4 225 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 PEX7O00628 323 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 ASH1LQ9NR48 2969 aaKnown RBP9.62□□□□□ -0.87
XRCC3-208ENST00000554811 CCDC168Q8NDH2 2452 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 DPRXA6NFQ7 191 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 COL8A1P27658 744 aa9.62□□□□□ -0.87
XRCC3-208ENST00000554811 KLF17Q5JT82 389 aaPredicted RBP9.62□□□□□ -0.87
XRCC3-208ENST00000554811 OR4C13Q8NGP0 309 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms