RNA–Protein interactions for RNA: ENST00000554805.6

SYNE2-213, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-213ENST00000554805 BMPR1BO00238 502 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 SLC25A5P05141 298 aaKnown RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 GPR6P46095 362 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 HNRNPA3P51991 378 aaKnown RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 SUB1P53999 127 aaKnown RBP eCLIP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 GNG5P63218 68 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 C19orf24Q9BVV8 132 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 CACNA1AO00555 2505 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 DSCAMO60469 2012 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 IZUMO1RA6ND01 250 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF324O75467 553 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 POU2AF1Q16633 256 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 HCP5Q6MZN7 132 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF788Q6ZQV5 615 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF439Q8NDP4 499 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 OR1L4Q8NGR5 311 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 OR1B1Q8NGR6 318 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 TIMM8BQ9Y5J9 83 aaPredicted RBP7.73□□□□□ -1.17
SYNE2-213ENST00000554805 ZFYVE26Q68DK2 2539 aa7.73□□□□□ -1.17
SYNE2-213ENST00000554805 FNDC10F2Z333 226 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 TMEM208Q9BTX3 173 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 SSBP4Q9BWG4 385 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MRPL32Q9BYC8 188 aaKnown RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF430Q9H8G1 570 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 BET1LQ9NYM9 111 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 PPIAL4AQ9Y536 164 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 A0A1W2PN81 502 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MBD3L4A6NDZ8 208 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MBD3L3A6NE82 208 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 DPRXA6NFQ7 191 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MBD3L5A6NJ08 208 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 PEX7O00628 323 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 SLC25A17O43808 307 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MOSP00540 346 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MMDQ15546 238 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 LCN12Q6JVE5 192 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 MBD3L2Q8NHZ7 208 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 OSR1Q8TAX0 266 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF714Q96N38 554 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 SAP30LQ9HAJ7 183 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 RALYQ9UKM9 306 aaKnown RBP7.72□□□□□ -1.17
SYNE2-213ENST00000554805 PLXNB1O43157 2135 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 M0R2Z0 102 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 TM4SF5O14894 197 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 TOX4O94842 621 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 C3orf79P0CE67 100 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 ESDP10768 282 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 TNFRSF1AP19438 455 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 CD40P25942 277 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 GAGE1Q13065 139 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 Q56UQ5 140 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 OR10J3Q5JRS4 329 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 C1orf185Q5T7R7 199 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 PDPNQ86YL7 162 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 FAM169BQ8N8A8 192 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 SLC25A2Q9BXI2 301 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 ARL2-SNX15V9GYD0 113 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 ACACBO00763 2458 aa7.72□□□□□ -1.17
SYNE2-213ENST00000554805 PGPA6NDG6 321 aa7.71□□□□□ -1.17
SYNE2-213ENST00000554805 E7EUB6 86 aa7.71□□□□□ -1.17
SYNE2-213ENST00000554805 OR2D3Q8NGH3 330 aa7.71□□□□□ -1.17
SYNE2-213ENST00000554805 CACNG8Q8WXS5 425 aa7.71□□□□□ -1.17
SYNE2-213ENST00000554805 ZNF835Q9Y2P0 537 aa7.71□□□□□ -1.17
SYNE2-213ENST00000554805 IGLV3-9A0A075B6K5 115 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 DLEU1O43261 78 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 IGLV2-8P01709 118 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 ATP5IP56385 69 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-213ENST00000554805 SLAQ13239 276 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 DIAPH2-AS1Q14236 149 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 TBR1Q16650 682 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 COL5A1-AS1Q5SY13 56 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 LINC00305Q7Z4B0 112 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 NUDT10Q8NFP7 164 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 TSKUQ8WUA8 353 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 NUDT11Q96G61 164 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 LINC00312Q9Y6C7 94 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 H0YJW9 148 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 NDUFB3O43676 98 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 NPSP0C0P6 89 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 GATA4P43694 442 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 PRB3Q04118 309 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-213ENST00000554805 C11orf42Q8N5U0 333 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 FAM222BQ8WU58 562 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 C22orf15Q8WYQ4 148 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 DAZAP1Q96EP5 407 aaKnown RBP7.71□□□□□ -1.18
SYNE2-213ENST00000554805 NCOR1P1Q9H4R4 102 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 LPAR2Q9HBW0 351 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 NDUFA4L2Q9NRX3 87 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 UQCR10Q9UDW1 63 aa7.71□□□□□ -1.18
SYNE2-213ENST00000554805 COL27A1Q8IZC6 1860 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-213ENST00000554805 SMIM27A0A1W2PRY6 76 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 VMA21Q3ZAQ7 101 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 C22orf34Q6ZV56 151 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 KLHDC1Q8N7A1 406 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 OR4C13Q8NGP0 309 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 VSTM2AQ8TAG5 236 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 FAM167A-AS1Q96KT0 104 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 FNDC4Q9H6D8 234 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-213ENST00000554805 FAM215AQ9Y5M1 114 aa7.7□□□□□ -1.18
SYNE2-213ENST00000554805 CORTO00230 105 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms