RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 FNDC4Q9H6D8 234 aaPredicted RBP7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 VSIRQ9H7M9 311 aa7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 RETNQ9HD89 108 aa7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 HEYLQ9NQ87 328 aaPredicted RBP7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 SHPKQ9UHJ6 478 aa7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 PUS1Q9Y606 427 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 TENM2Q9NT68 2774 aa7.74□□□□□ -1.17
PTCD2P1-201ENST00000554393 DUXBA0A1W2PPF3 345 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 UBE2CO00762 179 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 SLC25A4P12235 298 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 AKR1C4P17516 323 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 CCR6P51684 374 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 SMCO1Q147U7 214 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 ZNF79Q15937 498 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 LGI3Q8N145 548 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 SLC24A4Q8NFF2 622 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 SLC25A21Q9BQT8 299 aaPredicted RBP7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 TMEM231Q9H6L2 316 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 HSPB7Q9UBY9 170 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 TP53TG1Q9Y2A0 90 aa7.73□□□□□ -1.17
PTCD2P1-201ENST00000554393 TRAV2A0A0B4J234 112 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 A0A1B0GU03 582 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 CEBPZOSA8MTT3 80 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 IGKV1-17P01599 117 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 NPY1RP25929 384 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 ATP5IP56385 69 aaPredicted RBP7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 PAFAH1B2P68402 229 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 TNFRSF9Q07011 255 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 TMEM128Q5BJH2 165 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 SPANXN2Q5MJ10 180 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 ETFRF1Q6IPR1 90 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 Q6ZWC4 215 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 OVOL2Q9BRP0 275 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 MRPL36Q9P0J6 103 aaKnown RBP7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 UBQLN2Q9UHD9 624 aa7.72□□□□□ -1.17
PTCD2P1-201ENST00000554393 IGHV3-49A0A0A0MS15 119 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 A0A1W2PS18 150 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 IGLC1P0CG04 106 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 SLC25A6P12236 298 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 NPPCP23582 126 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 CRYBB3P26998 211 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 PRSS54Q6PEW0 395 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 TCF24Q7RTU0 167 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 LYZL2Q7Z4W2 148 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 WFDC3Q8IUB2 231 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 LRTM2Q8N967 370 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 OR1S2Q8NGQ3 325 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 TMEM170AQ8WVE7 144 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 ST8SIA2Q92186 375 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 METTL26Q96S19 204 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 U3KQ87 197 aa7.71□□□□□ -1.18
PTCD2P1-201ENST00000554393 DFFBO76075 338 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 RND2P52198 227 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 UBE2MP61081 183 aaKnown RBP7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 YPEL3P61236 119 aaPredicted RBP7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 MLANAQ16655 118 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 ZFAND6Q6FIF0 208 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 TMED4Q7Z7H5 227 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 STPG3Q8N7X2 389 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 DTD1Q8TEA8 209 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 NARS2Q96I59 477 aaKnown RBP7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 SRRQ9GZT4 340 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 MAP6D1Q9H9H5 199 aa7.7□□□□□ -1.18
PTCD2P1-201ENST00000554393 STARD9Q9P2P6 4700 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 IGHV3OR16-13A0A075B7E8 117 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 IGHV3-74A0A0B4J1X5 117 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 FAM90A26D6RGX4 464 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 PITX3O75364 302 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 IFNA10P01566 189 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 APOHP02749 345 aaPredicted RBP7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 OR10J1P30954 320 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 RBMS2Q15434 407 aaKnown RBP7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 TIGITQ495A1 244 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 LILRB2Q8N423 598 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 OR1S1Q8NH92 325 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 Q8WTZ3 238 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 GRAMD2BQ96HH9 432 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 MS4A6AQ9H2W1 248 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 RBKSQ9H477 322 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 TMED3Q9Y3Q3 217 aa7.69□□□□□ -1.18
PTCD2P1-201ENST00000554393 IGKV3-7A0A075B6H7 116 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 LCE6AA0A183 80 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 NAP1L6A6NFF2 107 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 DNASE2O00115 360 aaPredicted RBP7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 SPRY2O43597 315 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 NXPH3O95157 252 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 SFT2D2O95562 160 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 ATF4P18848 351 aaPredicted RBP7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 P2RY1P47900 373 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 TFPI2P48307 235 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 EIF2B2P49770 351 aaKnown RBP7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 DEFB135Q30KP9 77 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 CENPSQ8N2Z9 138 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 GBGT1Q8N5D6 347 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 RNF183Q96D59 192 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 U3KQE9 123 aa7.68□□□□□ -1.18
PTCD2P1-201ENST00000554393 IGHV3-66A0A0C4DH42 116 aa7.67□□□□□ -1.18
PTCD2P1-201ENST00000554393 HELTA6NFD8 242 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms