RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 TIMM9Q9Y5J7 89 aa11.26□□□□□ -0.61
SHMT2-210ENST00000553950 IGHV3-21A0A0B4J1V1 117 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 TCRBV4S1A1TA0A5B7 111 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 TGOLN2O43493 480 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 IGLC1P0CG04 106 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 S100A7P31151 101 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 GPR183P32249 361 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 CAMLGP49069 296 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 SRSF2Q01130 221 aaKnown RBP11.25□□□□□ -0.61
SHMT2-210ENST00000553950 RUNX1Q01196 453 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 DEFA5Q01523 94 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 AWAT1Q58HT5 328 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 RPL7L1Q6DKI1 246 aaKnown RBP11.25□□□□□ -0.61
SHMT2-210ENST00000553950 LAMTOR1Q6IAA8 161 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 C10orf99Q6UWK7 81 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 S100A7AQ86SG5 101 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 PSMG3Q9BT73 122 aaPredicted RBP11.25□□□□□ -0.61
SHMT2-210ENST00000553950 NPCDR1Q9BY65 106 aa11.25□□□□□ -0.61
SHMT2-210ENST00000553950 OR2T8A6NH00 312 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 NUDT19A8MXV4 375 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 ARL3P36405 182 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 YPEL3P61236 119 aaPredicted RBP11.24□□□□□ -0.61
SHMT2-210ENST00000553950 KRTAP24-1Q3LI83 254 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 PXDC1Q5TGL8 231 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 CYP2G1PQ6ZSU1 146 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 PRIMA1Q86XR5 153 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 NDUFA11Q86Y39 141 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 BAP18Q8IXM2 172 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 KLHL30-AS1Q8NEE0 82 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 BPIFCQ8NFQ6 507 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 PHYHIPLQ96FC7 376 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 GINS3Q9BRX5 216 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 C19orf24Q9BVV8 132 aa11.24□□□□□ -0.61
SHMT2-210ENST00000553950 PEF1Q9UBV8 284 aaKnown RBP11.24□□□□□ -0.61
SHMT2-210ENST00000553950 AGPAT2O15120 278 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 GGCTO75223 188 aaKnown RBP11.23□□□□□ -0.61
SHMT2-210ENST00000553950 TOMM40O96008 361 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 IGHV3-11P01762 117 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 IGHV3-48P01763 117 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 ZP3P21754 424 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 CLEC19AQ6UXS0 136 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 ZNF600Q6ZNG1 722 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 LURAP1LQ8IV03 231 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 HSD17B11Q8NBQ5 300 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 GGTLC1Q9BX51 225 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 ARV1Q9H2C2 271 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 GNB4Q9HAV0 340 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 WFDC1Q9HC57 220 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 CYTL1Q9NRR1 136 aa11.23□□□□□ -0.61
SHMT2-210ENST00000553950 F8W735 103 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-210ENST00000553950 IGHV3-23P01764 117 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 CLEC3BP05452 202 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 CD28P10747 220 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 RPL29P47914 159 aaKnown RBP11.22□□□□□ -0.61
SHMT2-210ENST00000553950 SERF2P84101 59 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 ZNF616Q08AN1 781 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 KIAA0141Q14154 515 aaPredicted RBP11.22□□□□□ -0.61
SHMT2-210ENST00000553950 MLANAQ16655 118 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 LCNL1Q6ZST4 164 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 OR2G3Q8NGZ4 309 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 Q8WTZ3 238 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 ST8SIA2Q92186 375 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 MGST2Q99735 147 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 MRPL36Q9P0J6 103 aaKnown RBP11.22□□□□□ -0.61
SHMT2-210ENST00000553950 RNF24Q9Y225 148 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 S4R3C0 116 aa11.22□□□□□ -0.61
SHMT2-210ENST00000553950 IGKV1D-37A0A075B6S9 117 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 IGKV1OR2-108A0A075B7D4 117 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 TSPAN15O95858 294 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 IGKV1-17P01599 117 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 MBP02144 154 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.61
SHMT2-210ENST00000553950 SEC11BP0C7V7 166 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 RD3LP0DJH9 198 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 ATP6V0CP27449 155 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 B2MP61769 119 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 RPEL1Q2QD12 228 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 TCTEX1D4Q5JR98 221 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 Q6ZRG5 221 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 OR51G1Q8NGK1 321 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 PFDN5Q99471 154 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 CITED2Q99967 270 aaPredicted RBP11.21□□□□□ -0.61
SHMT2-210ENST00000553950 PFDN2Q9UHV9 154 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 PXMP4Q9Y6I8 212 aa11.21□□□□□ -0.61
SHMT2-210ENST00000553950 UMAD1C9J7I0 102 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 I3L521 148 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 BMPR1BO00238 502 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 NDUFA4O00483 81 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 OR2C1O95371 312 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 CTSGP08311 255 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 LINC00869P0C866 280 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 SPP1P10451 314 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 RIPPLY3P57055 190 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 TIGITQ495A1 244 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 STPG3Q8N7X2 389 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 OR1L4Q8NGR5 311 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 DPF1Q92782 380 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 RSG1Q9BU20 258 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 SLC45A2Q9UMX9 530 aa11.2□□□□□ -0.62
SHMT2-210ENST00000553950 NF1P21359 2839 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms