RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 SAMD10Q9BYL1 202 aa11.74□□□□□ -0.53
ACTN1-211ENST00000553882 IGKV1D-37A0A075B6S9 117 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 TMEM11P17152 192 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 CDKN1AP38936 164 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 TPPP2P59282 170 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 TDRG1Q3Y452 100 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 SGK494Q96LW2 274 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 PAXXQ9BUH6 204 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 MRPL32Q9BYC8 188 aaKnown RBP11.73□□□□□ -0.53
ACTN1-211ENST00000553882 GNB4Q9HAV0 340 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 AMMECR1Q9Y4X0 333 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-211ENST00000553882 EREGO14944 169 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 ORM2P19652 201 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 DMRTC2Q8IXT2 367 aaPredicted RBP11.73□□□□□ -0.53
ACTN1-211ENST00000553882 FAM103A1Q9BTL3 118 aaKnown RBP11.73□□□□□ -0.53
ACTN1-211ENST00000553882 OSTCQ9NRP0 149 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 ANKHD1Q8IWZ3 2542 aaKnown RBP11.73□□□□□ -0.53
ACTN1-211ENST00000553882 TCRBV4S1A1TA0A5B7 111 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 LYNX1G3V0Z9 82 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 ISLRO14498 428 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 LYNX1P0DP58 116 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 CNTFRP26992 372 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 PRR27Q6MZM9 219 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 LINC00305Q7Z4B0 112 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 GNB1LQ9BYB4 327 aa11.73□□□□□ -0.53
ACTN1-211ENST00000553882 E7EQL1 145 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 IGHV1-8P0DP01 117 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 SUB1P53999 127 aaKnown RBP eCLIP11.72□□□□□ -0.53
ACTN1-211ENST00000553882 RANP62826 216 aaKnown RBP11.72□□□□□ -0.53
ACTN1-211ENST00000553882 GNG5P63218 68 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 BLNKQ8WV28 456 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 TNFRSF13BO14836 293 aaPredicted RBP11.72□□□□□ -0.53
ACTN1-211ENST00000553882 VMA21Q3ZAQ7 101 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 TMEM136Q6ZRR5 245 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
ACTN1-211ENST00000553882 PTPRQQ9UMZ3 2332 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 SHISA9B4DS77 424 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 DLX6P56179 175 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 TMEM155Q4W5P6 130 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 OR1B1Q8NGR6 318 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 RCHY1Q96PM5 261 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 CDC42EP3Q9UKI2 254 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 RPH3ALQ9UNE2 315 aa11.71□□□□□ -0.53
ACTN1-211ENST00000553882 C22orf46C9J442 243 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 PAFAH1B2P68402 229 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 TNXAQ16473 311 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 MRGPRG-AS1Q2M3A8 158 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 C1orf194Q5T5A4 169 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 C11orf42Q8N5U0 333 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 OR4A5Q8NH83 315 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 VN1R17PQ8TDU5 208 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 RNF114Q9Y508 228 aa11.71□□□□□ -0.54
ACTN1-211ENST00000553882 INS-IGF2F8WCM5 200 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 SRIP30626 198 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF329Q86UD4 541 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 LINC00311Q8N616 119 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 BEND2Q8NDZ0 799 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 PRSS33Q8NF86 280 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 OR1L4Q8NGR5 311 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 FXYD5Q96DB9 178 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 JKAMPQ9P055 326 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 TRBV9A0A0B4J1U6 114 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 VSTM5A8MXK1 200 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 H3BTX0 84 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 PEX7O00628 323 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 MFAP2P55001 183 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 TAS2R60P59551 318 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 PRR31Q5SQ13 230 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 TPTE2P1Q5T6R2 138 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 LEMD1Q68G75 181 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 RNF2Q99496 336 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 C2orf88Q9BSF0 95 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
ACTN1-211ENST00000553882 TNFRSF19Q9NS68 423 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 PAM16Q9Y3D7 125 aa11.7□□□□□ -0.54
ACTN1-211ENST00000553882 SMIM27A0A1W2PRY6 76 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 IGLC7A0M8Q6 106 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 FSTL3O95633 263 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 Q0VG73 95 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 WDR73Q6P4I2 378 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 ASCL5Q7RTU5 278 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 TMEM133Q9H2Q1 129 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 KIR2DL5BA0A0G2JN68 375 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 KIR2DL5BA0A0G2JPC4 375 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 BMPR1BO00238 502 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF253O75346 499 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 ESDP10768 282 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 PMCHP20382 165 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 RPL19P84098 196 aaKnown RBP11.69□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF124Q15973 351 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 FAM71F2Q6NXP2 309 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 KIR2DL5AQ8N109 375 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 SIGLECL1Q8N7X8 197 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 ZNF596Q8TC21 504 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 ATG101Q9BSB4 218 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 SNHG12Q9BXW3 62 aa11.69□□□□□ -0.54
ACTN1-211ENST00000553882 MT-ND6P03923 174 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 AMY1AP04745 511 aa11.68□□□□□ -0.54
ACTN1-211ENST00000553882 MC5RP33032 325 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms