RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 DFFBO76075 338 aa13.1□□□□□ -0.31
FOXN3-204ENST00000553840 APOHP02749 345 aaPredicted RBP13.1□□□□□ -0.31
FOXN3-204ENST00000553840 NPY1RP25929 384 aa13.1□□□□□ -0.31
FOXN3-204ENST00000553840 Q8WTZ3 238 aa13.1□□□□□ -0.31
FOXN3-204ENST00000553840 TRIM63Q969Q1 353 aa13.1□□□□□ -0.31
FOXN3-204ENST00000553840 RNF183Q96D59 192 aa13.1□□□□□ -0.31
FOXN3-204ENST00000553840 MS4A6AQ9H2W1 248 aa13.1□□□□□ -0.31
FOXN3-204ENST00000553840 MRPL36Q9P0J6 103 aaKnown RBP13.1□□□□□ -0.31
FOXN3-204ENST00000553840 NXPH3O95157 252 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 IFNA10P01566 189 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 INPP1P49441 399 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 EIF2B2P49770 351 aaKnown RBP13.09□□□□□ -0.31
FOXN3-204ENST00000553840 RND2P52198 227 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 TNFRSF9Q07011 255 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 KLF9Q13886 244 aaPredicted RBP13.09□□□□□ -0.31
FOXN3-204ENST00000553840 SMCO1Q147U7 214 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 TIGITQ495A1 244 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 NMSQ5H8A3 153 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 TMEM217Q8N7C4 229 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 DEDD2Q8WXF8 326 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 RABAC1Q9UI14 185 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 U3KQ87 197 aa13.09□□□□□ -0.31
FOXN3-204ENST00000553840 A0A0J9YWU9 116 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 MPTX1A8MV57 137 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 CRYBB3P26998 211 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 TMEM128Q5BJH2 165 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 TRIQKQ629K1 86 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 PRSS54Q6PEW0 395 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 TMED4Q7Z7H5 227 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 LYG2Q86SG7 212 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 OR1S1Q8NH92 325 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 PRR13Q9NZ81 148 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 TENM2Q9NT68 2774 aa13.08□□□□□ -0.32
FOXN3-204ENST00000553840 DUXBA0A1W2PPF3 345 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 IGKV1-17P01599 117 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 OR10J1P30954 320 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 P2RY1P47900 373 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 ATP5IP56385 69 aaPredicted RBP13.07□□□□□ -0.32
FOXN3-204ENST00000553840 YPEL3P61236 119 aaPredicted RBP13.07□□□□□ -0.32
FOXN3-204ENST00000553840 SUPT4H1P63272 117 aaKnown RBP13.07□□□□□ -0.32
FOXN3-204ENST00000553840 ZNF124Q15973 351 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 BAK1Q16611 211 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 LYZL2Q7Z4W2 148 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 LILRB2Q8N423 598 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 DTD1Q8TEA8 209 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 GATAD1Q8WUU5 269 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 PTTG2Q9NZH5 202 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 HSPB7Q9UBY9 170 aa13.07□□□□□ -0.32
FOXN3-204ENST00000553840 LINC00854A0A1B0GVQ3 168 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 CXorf65A6NEN9 183 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 IGLC1P0CG04 106 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 AP2S1P53680 142 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-204ENST00000553840 DEFB131AP59861 70 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 STXBP6Q8NFX7 210 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 SDHCQ99643 169 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-204ENST00000553840 SLC25A21Q9BQT8 299 aaPredicted RBP13.06□□□□□ -0.32
FOXN3-204ENST00000553840 RBKSQ9H477 322 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 RYR3Q15413 4870 aa13.06□□□□□ -0.32
FOXN3-204ENST00000553840 HELTA6NFD8 242 aa13.05□□□□□ -0.32
FOXN3-204ENST00000553840 HNRNPCP07910 306 aaKnown RBP eCLIP13.05□□□□□ -0.322e-6■■□□□ 14.2
FOXN3-204ENST00000553840 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
FOXN3-204ENST00000553840 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
FOXN3-204ENST00000553840 CSMD3Q7Z407 3707 aa13.04□□□□□ -0.32
FOXN3-204ENST00000553840 IFNA4P05014 189 aa13.04□□□□□ -0.32
FOXN3-204ENST00000553840 ATF4P18848 351 aaPredicted RBP13.04□□□□□ -0.32
FOXN3-204ENST00000553840 VAMP1P23763 118 aa13.04□□□□□ -0.32
FOXN3-204ENST00000553840 RBMS2Q15434 407 aaKnown RBP13.04□□□□□ -0.32
FOXN3-204ENST00000553840 LINC00299Q6ZSB3 139 aa13.04□□□□□ -0.32
FOXN3-204ENST00000553840 STHQ8IWL8 128 aa13.04□□□□□ -0.32
FOXN3-204ENST00000553840 TMEM170AQ8WVE7 144 aa13.04□□□□□ -0.32
FOXN3-204ENST00000553840 NUPR2A6NF83 97 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 K7EQG2 157 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 TOMM40O96008 361 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 IL4P05112 153 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 RD3LP0DJH9 198 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 IL7P13232 177 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 PMS2P11Q13670 270 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 LEMD1Q68G75 181 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 S100ZQ8WXG8 99 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 RARRES2Q99969 163 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 PFDN2Q9UHV9 154 aa13.03□□□□□ -0.32
FOXN3-204ENST00000553840 CA1P00915 261 aaPredicted RBP13.02□□□□□ -0.33
FOXN3-204ENST00000553840 RAB11AP62491 216 aa13.02□□□□□ -0.33
FOXN3-204ENST00000553840 C16orf54Q6UWD8 224 aa13.02□□□□□ -0.33
FOXN3-204ENST00000553840 SLC35E1Q96K37 410 aa13.02□□□□□ -0.33
FOXN3-204ENST00000553840 TMED3Q9Y3Q3 217 aa13.02□□□□□ -0.33
FOXN3-204ENST00000553840 U3KQE9 123 aa13.02□□□□□ -0.33
FOXN3-204ENST00000553840 FAM90A26D6RGX4 464 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 MED6O75586 246 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 FABP1P07148 127 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 SLC25A6P12236 298 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 GPX4P36969 197 aaPredicted RBP13.01□□□□□ -0.33
FOXN3-204ENST00000553840 NUP62P37198 522 aaPredicted RBP13.01□□□□□ -0.33
FOXN3-204ENST00000553840 DHRS2Q13268 280 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 CENPSQ8N2Z9 138 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 FAM24BQ8N5W8 94 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 LRTM2Q8N967 370 aa13.01□□□□□ -0.33
FOXN3-204ENST00000553840 NAP1L6A6NFF2 107 aa13□□□□□ -0.33
FOXN3-204ENST00000553840 ZFP92A6NM28 416 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms