RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 DOLPP1Q86YN1 238 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 NPVFQ9HCQ7 196 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 JPT1Q9UK76 154 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 TET2Q6N021 2002 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-207ENST00000553837 RAI1Q7Z5J4 1906 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-207ENST00000553837 KLK10O43240 276 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 SAP30O75446 220 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 KLF5Q13887 457 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-207ENST00000553837 C1orf122Q6ZSJ8 110 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 WIPF2Q8TF74 440 aaPredicted RBP9.98□□□□□ -0.81
SHMT2-207ENST00000553837 CALYQ9NYX4 217 aa9.98□□□□□ -0.81
SHMT2-207ENST00000553837 DSCAML1Q8TD84 2053 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 FOXH1O75593 365 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 NUDT3O95989 172 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 IGHV1-46P01743 117 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 CRYBB3P26998 211 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 GPR6P46095 362 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-207ENST00000553837 IBA57Q5T440 356 aaKnown RBP9.97□□□□□ -0.81
SHMT2-207ENST00000553837 GTF2H5Q6ZYL4 71 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 GCM1Q9NP62 436 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 HEYLQ9NQ87 328 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-207ENST00000553837 SERTAD4Q9NUC0 356 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 CEP250Q9BV73 2442 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 OR2T8A6NH00 312 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 C2orf70A6NJV1 201 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 CD5LO43866 347 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 GFRA3O60609 400 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 RAB31Q13636 194 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 CT45A1Q5HYN5 189 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 BVES-AS1Q5T3Y7 98 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 SPATA31B1PQ5VZV4 182 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 ERASQ7Z444 233 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 MTURNQ8N3F0 131 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 DEFB108BQ8NET1 73 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 CT45A3Q8NHU0 189 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 FAM222BQ8WU58 562 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 SSMEM1Q8WWF3 244 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 DDB2Q92466 427 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 SNRNP40Q96DI7 357 aaKnown RBP9.97□□□□□ -0.81
SHMT2-207ENST00000553837 TMEM70Q9BUB7 260 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 SSBP4Q9BWG4 385 aaPredicted RBP9.97□□□□□ -0.81
SHMT2-207ENST00000553837 SAP30LQ9HAJ7 183 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 TMEM167BQ9NRX6 74 aa9.97□□□□□ -0.81
SHMT2-207ENST00000553837 DCHS1Q96JQ0 3298 aa9.96□□□□□ -0.81
SHMT2-207ENST00000553837 PPIAL4EA0A075B759 164 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 PPIAL4CA0A0B4J2A2 164 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 FAM90A9PA6NNJ1 464 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 PPIAL4DF5H284 164 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 GNG7O60262 68 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 PPIAL4FP0DN26 164 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 CEACAM3P40198 252 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 GATA4P43694 442 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 PSG9Q00887 426 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 SLAQ13239 276 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 SPACA3Q8IXA5 215 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 FAM57AQ8TBR7 257 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 NEUROG1Q92886 237 aa9.96□□□□□ -0.82
SHMT2-207ENST00000553837 LSM4Q9Y4Z0 139 aaKnown RBP9.96□□□□□ -0.82
SHMT2-207ENST00000553837 PRSS46E5RG02 174 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 COL8A2P25067 703 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 NPY1RP25929 384 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 CD40P25942 277 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 REG1BP48304 166 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 C3orf36Q3SXR2 165 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 FAM162BQ5T6X4 162 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 SLC25A34Q6PIV7 304 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 TEPPQ6URK8 271 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 C5orf17Q8NAS9 161 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 OR1N2Q8NGR9 330 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 OR4A16Q8NH70 328 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 COMMD5Q9GZQ3 224 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 TNFRSF19Q9NS68 423 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 SLC25A10Q9UBX3 287 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-207ENST00000553837 KALRNO60229 2985 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 GVINP1Q7Z2Y8 2422 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 VDAC2P45880 294 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-207ENST00000553837 TNFAIP6P98066 277 aaPredicted RBP9.95□□□□□ -0.82
SHMT2-207ENST00000553837 C5orf64Q2M2E5 130 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 PRAMEF5Q5TYX0 476 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 RNASEKQ6P5S7 137 aaKnown RBP9.95□□□□□ -0.82
SHMT2-207ENST00000553837 ASCL5Q7RTU5 278 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 NEGR1Q7Z3B1 354 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 FAM216BQ8N7L0 139 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 STPG3Q8N7X2 389 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 STXBP6Q8NFX7 210 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 OR1B1Q8NGR6 318 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 OR52E5Q8NH55 327 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 PPP1R35Q8TAP8 253 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 GAFA1Q96PS6 74 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 CCL13Q99616 98 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 SIGMAR1Q99720 223 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 TECRQ9NZ01 308 aaKnown RBP9.95□□□□□ -0.82
SHMT2-207ENST00000553837 C1RLQ9NZP8 487 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 ZNRD1Q9P1U0 126 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 RNF7Q9UBF6 113 aa9.95□□□□□ -0.82
SHMT2-207ENST00000553837 OR4C46A6NHA9 309 aa9.94□□□□□ -0.82
SHMT2-207ENST00000553837 CRXO43186 299 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-207ENST00000553837 SAA2P0DJI9 122 aaPredicted RBP9.94□□□□□ -0.82
SHMT2-207ENST00000553837 MGST1P10620 155 aaKnown RBP9.94□□□□□ -0.82
SHMT2-207ENST00000553837 PPOXP50336 477 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms