RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 SCP2D1Q9UJQ7 156 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 RYR1P21817 5038 aa9.36□□□□□ -0.91
LINC00643-202ENST00000553426 CTDSPLO15194 276 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 RBMS2Q15434 407 aaKnown RBP9.35□□□□□ -0.91
LINC00643-202ENST00000553426 MLANAQ16655 118 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 TIGITQ495A1 244 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 C2orf83Q53S99 150 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 CLVS1Q8IUQ0 354 aaPredicted RBP9.35□□□□□ -0.91
LINC00643-202ENST00000553426 SELENOHQ8IZQ5 122 aaKnown RBP9.35□□□□□ -0.91
LINC00643-202ENST00000553426 CENPSQ8N2Z9 138 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 SLC24A4Q8NFF2 622 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 OR4C16Q8NGL9 310 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 RAB2BQ8WUD1 216 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 FBXL17Q9UF56 701 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 GPR132Q9UNW8 380 aa9.35□□□□□ -0.91
LINC00643-202ENST00000553426 PIGBOS1A0A0B4J2F0 54 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 CRYM-AS1A6NIL9 109 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 NOL3O60936 208 aaKnown RBP9.34□□□□□ -0.91
LINC00643-202ENST00000553426 IGKV1-17P01599 117 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
LINC00643-202ENST00000553426 SULT1A3P0DMM9 295 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 SULT1A4P0DMN0 295 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 OR10J1P30954 320 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 RND2P52198 227 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 SPCS2Q15005 226 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 PRSS54Q6PEW0 395 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 MORN3Q6PF18 240 aaPredicted RBP9.34□□□□□ -0.91
LINC00643-202ENST00000553426 OR51S1Q8NGJ8 323 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 IL22RA2Q969J5 263 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 GPR146Q96CH1 333 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 MRPL36Q9P0J6 103 aaKnown RBP9.34□□□□□ -0.91
LINC00643-202ENST00000553426 RSL24D1Q9UHA3 163 aaKnown RBP9.34□□□□□ -0.91
LINC00643-202ENST00000553426 TMEM56-RWDD3S4R434 201 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 HECTD4Q9Y4D8 3996 aa9.34□□□□□ -0.91
LINC00643-202ENST00000553426 KMT2AQ03164 3969 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 K7EQG2 157 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 SPP1P10451 314 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 ANXA3P12429 323 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 ALDH3B2P48448 385 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 NANOS2P60321 138 aaKnown RBP9.33□□□□□ -0.92
LINC00643-202ENST00000553426 YPEL3P61236 119 aaPredicted RBP9.33□□□□□ -0.92
LINC00643-202ENST00000553426 DHRS2Q13268 280 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 FAM24BQ8N5W8 94 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 LHFPL5Q8TAF8 219 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 BCL7BQ9BQE9 202 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 MCUBQ9NWR8 336 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 CCDC59Q9P031 241 aaKnown RBP9.33□□□□□ -0.92
LINC00643-202ENST00000553426 U3KQ87 197 aa9.33□□□□□ -0.92
LINC00643-202ENST00000553426 GSTZ1O43708 216 aaPredicted RBP9.32□□□□□ -0.92
LINC00643-202ENST00000553426 IFNA10P01566 189 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 ZNF688P0C7X2 276 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 IGLC1P0CG04 106 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 NPY1RP25929 384 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 CCR6P51684 374 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 TMBIM6P55061 237 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
LINC00643-202ENST00000553426 SRPXP78539 464 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 LGALS9CQ6DKI2 356 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 C2CD4CQ8TF44 421 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 ACY3Q96HD9 319 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 PFDN2Q9UHV9 154 aa9.32□□□□□ -0.92
LINC00643-202ENST00000553426 A0A0B4J2A0 478 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 ANKRD20A5PA0PJZ0 165 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 DEFB4AO15263 64 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 NXPH3O95157 252 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 IL4P05112 153 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 RD3LP0DJH9 198 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 AKR1C4P17516 323 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 NUP62P37198 522 aaPredicted RBP9.31□□□□□ -0.92
LINC00643-202ENST00000553426 TCTAP57738 103 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 NUTF2P61970 127 aaKnown RBP9.31□□□□□ -0.92
LINC00643-202ENST00000553426 ACTL10Q5JWF8 245 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 C16orf54Q6UWD8 224 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 TRPT1Q86TN4 253 aaKnown RBP9.31□□□□□ -0.92
LINC00643-202ENST00000553426 DCANP1Q8TF63 244 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 NPIPB3Q92617 1050 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 SHPKQ9UHJ6 478 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 U3KQE9 123 aa9.31□□□□□ -0.92
LINC00643-202ENST00000553426 KIAA1109Q2LD37 5005 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 FABP12A6NFH5 140 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 KNCNA6PVL3 124 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 C11orf94C9JXX5 98 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 TOMM40O96008 361 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 MIFP14174 115 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 FAUP35544 74 aaKnown RBP9.3□□□□□ -0.92
LINC00643-202ENST00000553426 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
LINC00643-202ENST00000553426 SMCO1Q147U7 214 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 NMSQ5H8A3 153 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 PSMG4Q5JS54 123 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 LGI3Q8N145 548 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 DYNC2LI1Q8TCX1 351 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 DTD1Q8TEA8 209 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 C1QTNF4Q9BXJ3 329 aa9.3□□□□□ -0.92
LINC00643-202ENST00000553426 FABP1P07148 127 aa9.29□□□□□ -0.92
LINC00643-202ENST00000553426 AP3S2P59780 193 aa9.29□□□□□ -0.92
LINC00643-202ENST00000553426 SIGLEC15Q6ZMC9 328 aa9.29□□□□□ -0.92
LINC00643-202ENST00000553426 OR51G1Q8NGK1 321 aa9.29□□□□□ -0.92
LINC00643-202ENST00000553426 OR1S1Q8NH92 325 aa9.29□□□□□ -0.92
LINC00643-202ENST00000553426 GLMPQ8WWB7 406 aa9.29□□□□□ -0.92
LINC00643-202ENST00000553426 RAB40CQ96S21 281 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms