RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 SELENOKQ9Y6D0 94 aa11.49□□□□□ -0.57
SHMT2-204ENST00000553324 LYRM1O43325 122 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 OR10J1P30954 320 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 YPEL3P61236 119 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-204ENST00000553324 DHRS2Q13268 280 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 GGNBP1Q5YKI7 109 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 LYG2Q86SG7 212 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 TMEM170AQ8WVE7 144 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 ZNF414Q96IQ9 312 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 METTL26Q96S19 204 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 RNF2Q99496 336 aa11.48□□□□□ -0.57
SHMT2-204ENST00000553324 MRPL36Q9P0J6 103 aaKnown RBP11.48□□□□□ -0.57
SHMT2-204ENST00000553324 PLA2G10O15496 165 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 IGKV1-17P01599 117 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 IGLC1P0CG04 106 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 BTCP35070 178 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 RND2P52198 227 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 NPIPB3Q92617 1050 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 ZFAND3Q9H8U3 227 aa11.47□□□□□ -0.57
SHMT2-204ENST00000553324 SYNGR2O43760 224 aa11.46□□□□□ -0.57
SHMT2-204ENST00000553324 ANXA7P20073 488 aaKnown RBP11.46□□□□□ -0.57
SHMT2-204ENST00000553324 TIGITQ495A1 244 aa11.46□□□□□ -0.57
SHMT2-204ENST00000553324 FAM90A2PQ658T7 463 aa11.46□□□□□ -0.57
SHMT2-204ENST00000553324 BATF3Q9NR55 127 aa11.46□□□□□ -0.57
SHMT2-204ENST00000553324 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-204ENST00000553324 IGHV3-49A0A0A0MS15 119 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 RBMY1BA6NDE4 496 aaKnown RBP11.45□□□□□ -0.58
SHMT2-204ENST00000553324 RBMY1EA6NEQ0 496 aaKnown RBP11.45□□□□□ -0.58
SHMT2-204ENST00000553324 TCRBP04435 133 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 RBMY1DP0C7P1 496 aaKnown RBP11.45□□□□□ -0.58
SHMT2-204ENST00000553324 RD3LP0DJH9 198 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 CRYBB3P26998 211 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 ID3Q02535 119 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 TCF24Q7RTU0 167 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 MITD1Q8WV92 249 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 ACY3Q96HD9 319 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 GRAMD2BQ96HH9 432 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 SLC35E1Q96K37 410 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 WDR12Q9GZL7 423 aaKnown RBP11.45□□□□□ -0.58
SHMT2-204ENST00000553324 C20orf85Q9H1P6 137 aa11.45□□□□□ -0.58
SHMT2-204ENST00000553324 ADAP1O75689 374 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 FABP1P07148 127 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 IAPPP10997 89 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 EIF2B2P49770 351 aaKnown RBP11.44□□□□□ -0.58
SHMT2-204ENST00000553324 RPL11P62913 178 aaKnown RBP11.44□□□□□ -0.58
SHMT2-204ENST00000553324 MZT2BQ6NZ67 158 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 ST8SIA2Q92186 375 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 GGTLC1Q9BX51 225 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 WFDC10AQ9H1F0 79 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 PTTG2Q9NZH5 202 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 PFDN2Q9UHV9 154 aa11.44□□□□□ -0.58
SHMT2-204ENST00000553324 IGHV3OR16-13A0A075B7E8 117 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 IGHV3-74A0A0B4J1X5 117 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 TRAV2A0A0B4J234 112 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 FAM240BA0A1B0GVZ2 78 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 DNASE2O00115 360 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-204ENST00000553324 WRBO00258 174 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 TOMM40O96008 361 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 APOHP02749 345 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-204ENST00000553324 NKX2-1P43699 371 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-204ENST00000553324 AP2S1P53680 142 aaPredicted RBP11.43□□□□□ -0.58
SHMT2-204ENST00000553324 GAMTQ14353 236 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 CITED4Q96RK1 184 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 MAGT1Q9H0U3 335 aa11.43□□□□□ -0.58
SHMT2-204ENST00000553324 PAIP2BQ9ULR5 123 aaKnown RBP11.43□□□□□ -0.58
SHMT2-204ENST00000553324 ZFP92A6NM28 416 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 C3orf84H3BNL1 204 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 DFFBO76075 338 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 HNRNPCP07910 306 aaKnown RBP eCLIP11.42□□□□□ -0.58
SHMT2-204ENST00000553324 APOC4P55056 127 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 ZNF846Q147U1 533 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 OR51G1Q8NGK1 321 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 UBQLN2Q9UHD9 624 aa11.42□□□□□ -0.58
SHMT2-204ENST00000553324 STRAPQ9Y3F4 350 aaKnown RBP11.42□□□□□ -0.58
SHMT2-204ENST00000553324 IGKV3-7A0A075B6H7 116 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 IGHV3-66A0A0C4DH42 116 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 HELTA6NFD8 242 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 UBE2CO00762 179 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 IL4P05112 153 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 PSG1P11464 419 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 NUP62P37198 522 aaPredicted RBP11.41□□□□□ -0.58
SHMT2-204ENST00000553324 TFPI2P48307 235 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 ODF3L2Q3SX64 289 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 SPANXN5Q5MJ07 72 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 LILRB2Q8N423 598 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 GBGT1Q8N5D6 347 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 MS4A6AQ9H2W1 248 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 NUDT15Q9NV35 164 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 RABAC1Q9UI14 185 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 U3KQE9 123 aa11.41□□□□□ -0.58
SHMT2-204ENST00000553324 TRAV6A0A075B6T7 132 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 KIR2DL5BA0A0G2JN68 375 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 KIR2DL5BA0A0G2JPC4 375 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 MPTX1A8MV57 137 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 SNRPGP15A8MWD9 76 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 CFDP00746 253 aaPredicted RBP11.4□□□□□ -0.58
SHMT2-204ENST00000553324 H2AFB2P0C5Z0 115 aa11.4□□□□□ -0.58
SHMT2-204ENST00000553324 P2RY1P47900 373 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms