RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 PRSS54Q6PEW0 395 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 LYZL2Q7Z4W2 148 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 CCDC190Q86UF4 302 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 APRG1Q8IVJ8 170 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 GBGT1Q8N5D6 347 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 OR1S2Q8NGQ3 325 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 NARS2Q96I59 477 aaKnown RBP9.59□□□□□ -0.87
ACTN1-207ENST00000553290 SLC25A21Q9BQT8 299 aaPredicted RBP9.59□□□□□ -0.87
ACTN1-207ENST00000553290 HSPB7Q9UBY9 170 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 U3KQ87 197 aa9.59□□□□□ -0.87
ACTN1-207ENST00000553290 LCE6AA0A183 80 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 DFFBO76075 338 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 NXPH3O95157 252 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 IFNA10P01566 189 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 RPL35AP18077 110 aaKnown RBP9.58□□□□□ -0.88
ACTN1-207ENST00000553290 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
ACTN1-207ENST00000553290 RPL11P62913 178 aaKnown RBP9.58□□□□□ -0.88
ACTN1-207ENST00000553290 TIGITQ495A1 244 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 SPANXN2Q5MJ10 180 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 TMED4Q7Z7H5 227 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 LILRB2Q8N423 598 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 DTD1Q8TEA8 209 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 MS4A6AQ9H2W1 248 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 MAP6D1Q9H9H5 199 aa9.58□□□□□ -0.88
ACTN1-207ENST00000553290 STARD9Q9P2P6 4700 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 IGHV3-66A0A0C4DH42 116 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 IGLC1P0CG04 106 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 OR10J1P30954 320 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 ATP5IP56385 69 aaPredicted RBP9.57□□□□□ -0.88
ACTN1-207ENST00000553290 DEFB135Q30KP9 77 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 OR1S1Q8NH92 325 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 Q8WTZ3 238 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 TMEM170AQ8WVE7 144 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 RNF183Q96D59 192 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 GRAMD2BQ96HH9 432 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 RBKSQ9H477 322 aa9.57□□□□□ -0.88
ACTN1-207ENST00000553290 P2RY1P47900 373 aa9.56□□□□□ -0.88
ACTN1-207ENST00000553290 EIF2B2P49770 351 aaKnown RBP9.56□□□□□ -0.88
ACTN1-207ENST00000553290 ZNF124Q15973 351 aa9.56□□□□□ -0.88
ACTN1-207ENST00000553290 LRTM2Q8N967 370 aa9.56□□□□□ -0.88
ACTN1-207ENST00000553290 NPIPB3Q92617 1050 aa9.56□□□□□ -0.88
ACTN1-207ENST00000553290 CSTL1Q9H114 145 aa9.56□□□□□ -0.88
ACTN1-207ENST00000553290 RABAC1Q9UI14 185 aa9.56□□□□□ -0.88
ACTN1-207ENST00000553290 DYNC2H1Q8NCM8 4307 aaKnown RBP9.56□□□□□ -0.88
ACTN1-207ENST00000553290 MPTX1A8MV57 137 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 HNRNPCP07910 306 aaKnown RBP eCLIP9.55□□□□□ -0.88
ACTN1-207ENST00000553290 SLC25A6P12236 298 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 VAMP1P23763 118 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 DEFB131AP59861 70 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 LYG2Q86SG7 212 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 ACY3Q96HD9 319 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 SRRQ9GZT4 340 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 TMED3Q9Y3Q3 217 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 U3KQE9 123 aa9.55□□□□□ -0.88
ACTN1-207ENST00000553290 A0A0J9YWU9 116 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 NAP1L6A6NFF2 107 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 FAM90A26D6RGX4 464 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 PITX3O75364 302 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 SFT2D2O95562 160 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 TOMM40O96008 361 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 IFNA4P05014 189 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 RD3LP0DJH9 198 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 ATF4P18848 351 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-207ENST00000553290 GPX4P36969 197 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-207ENST00000553290 INPP1P49441 399 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 AP2S1P53680 142 aaPredicted RBP9.54□□□□□ -0.88
ACTN1-207ENST00000553290 RBMS2Q15434 407 aaKnown RBP9.54□□□□□ -0.88
ACTN1-207ENST00000553290 CENPSQ8N2Z9 138 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 STXBP6Q8NFX7 210 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 GATAD1Q8WUU5 269 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 LYSTQ99698 3801 aa9.54□□□□□ -0.88
ACTN1-207ENST00000553290 HELTA6NFD8 242 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 K7EQG2 157 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 MED6O75586 246 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 JTBO76095 146 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 IL4P05112 153 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 UBE2MP61081 183 aaKnown RBP9.53□□□□□ -0.88
ACTN1-207ENST00000553290 PPP1R1AQ13522 171 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 TRIQKQ629K1 86 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 C16orf54Q6UWD8 224 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 TMEM217Q8N7C4 229 aa9.53□□□□□ -0.88
ACTN1-207ENST00000553290 PSG1P11464 419 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 RAB11AP62491 216 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 GAMTQ14353 236 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 USF2Q15853 346 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-207ENST00000553290 LEMD1Q68G75 181 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 STHQ8IWL8 128 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 FAM24BQ8N5W8 94 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 DCANP1Q8TF63 244 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 GLMPQ8WWB7 406 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 SLC35E1Q96K37 410 aa9.52□□□□□ -0.89
ACTN1-207ENST00000553290 CIB3Q96Q77 187 aaPredicted RBP9.52□□□□□ -0.89
ACTN1-207ENST00000553290 ZFP92A6NM28 416 aa9.51□□□□□ -0.89
ACTN1-207ENST00000553290 NDUFB6O95139 128 aa9.51□□□□□ -0.89
ACTN1-207ENST00000553290 FABP1P07148 127 aa9.51□□□□□ -0.89
ACTN1-207ENST00000553290 HOXB5P09067 269 aa9.51□□□□□ -0.89
ACTN1-207ENST00000553290 NUP62P37198 522 aaPredicted RBP9.51□□□□□ -0.89
ACTN1-207ENST00000553290 RPP30P78346 268 aaKnown RBP9.51□□□□□ -0.89
ACTN1-207ENST00000553290 BAK1Q16611 211 aa9.51□□□□□ -0.89
ACTN1-207ENST00000553290 OR51G1Q8NGK1 321 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms