RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 SDHAF1A6NFY7 115 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 HMSDA8MTL9 139 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 HTR1AP08908 422 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 METTL15P1P0C7V9 234 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 TRGC1P0CF51 173 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 CSRP1P21291 193 aaKnown RBP2.97□□□□□ -1.93
SCFD1-208ENST00000553278 NFYBP25208 207 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 HCP5Q6MZN7 132 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 C12orf29Q8N999 325 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 OR5A1Q8NGJ0 315 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 CANT1Q8WVQ1 401 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 ADAT3Q96EY9 351 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-208ENST00000553278 RMND5BQ96G75 393 aaPredicted RBP2.97□□□□□ -1.93
SCFD1-208ENST00000553278 EFCAB11Q9BUY7 163 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 KRTAP4-3Q9BYR4 195 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 KDM5BQ9UGL1 1544 aa2.97□□□□□ -1.93
SCFD1-208ENST00000553278 CCDC88AQ3V6T2 1871 aa2.96□□□□□ -1.93
SCFD1-208ENST00000553278 IGKV3D-11A0A0A0MRZ8 115 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 A0A1B0GVG6 124 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 OR51F1A6NGY5 319 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 COX6A1P12074 109 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 RAB4BP61018 213 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 UBE2BP63146 152 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 ZNF791Q3KP31 576 aaPredicted RBP2.96□□□□□ -1.94
SCFD1-208ENST00000553278 KRTAP13-3Q3SY46 172 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 IFT20Q8IY31 132 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 WFDC11Q8NEX6 87 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 AIF1LQ9BQI0 150 aa2.96□□□□□ -1.94
SCFD1-208ENST00000553278 ZCCHC11Q5TAX3 1644 aaKnown RBP2.96□□□□□ -1.94
SCFD1-208ENST00000553278 MED1Q15648 1581 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-208ENST00000553278 RIC1Q4ADV7 1423 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 TRGV10A0A0A0MS01 117 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 C7orf71A4D174 169 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 MEIS3P1A6NDR6 274 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 C3orf84H3BNL1 204 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 M0R378 163 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 ARPC4P59998 168 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 SURF2Q15527 256 aaPredicted RBP2.95□□□□□ -1.94
SCFD1-208ENST00000553278 SS18Q15532 418 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 AAED1Q7RTV5 226 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 DEFB128Q7Z7B8 93 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 OR4E2Q8NGC2 313 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 RTL8AQ9BWD3 113 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 SPANXA1Q9NS26 97 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 PRO2289Q9P1D8 64 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 BAIAP2Q9UQB8 552 aa2.95□□□□□ -1.94
SCFD1-208ENST00000553278 SETD5Q9C0A6 1442 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 FUOMA2VDF0 154 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 J3QQQ9 107 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 TRGC2P03986 189 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 RNASE4P34096 147 aaKnown RBP2.94□□□□□ -1.94
SCFD1-208ENST00000553278 RPL26P61254 145 aaKnown RBP2.94□□□□□ -1.94
SCFD1-208ENST00000553278 RELAQ04206 551 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 LCN15Q6UWW0 184 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 Q6ZTI0 123 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 KRTAP5-2Q701N4 177 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 OR10J5Q8NHC4 309 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 DCANP1Q8TF63 244 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 GPX7Q96SL4 187 aaPredicted RBP2.94□□□□□ -1.94
SCFD1-208ENST00000553278 LRTM1Q9HBL6 345 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 OR52A1Q9UKL2 312 aa2.94□□□□□ -1.94
SCFD1-208ENST00000553278 RPL26L1Q9UNX3 145 aaKnown RBP2.94□□□□□ -1.94
SCFD1-208ENST00000553278 SCAF11Q99590 1463 aaKnown RBP2.94□□□□□ -1.94
SCFD1-208ENST00000553278 KIAA2026Q5HYC2 2103 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 ARRDC5A6NEK1 342 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 TLCD2A6NGC4 264 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 TMEM256-PLSCR3K7ERE1 68 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 FAM107AO95990 144 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 FUSP35637 526 aaKnown RBP eCLIP2.93□□□□□ -1.94
SCFD1-208ENST00000553278 SARNPP82979 210 aaKnown RBP2.93□□□□□ -1.94
SCFD1-208ENST00000553278 FKBP1CQ5VVH2 108 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 C22orf39Q6P5X5 142 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 TMEM35BQ8NCS4 154 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 PPTC7Q8NI37 304 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 TEX37Q96LM6 180 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 NHP2Q9NX24 153 aaKnown RBP2.93□□□□□ -1.94
SCFD1-208ENST00000553278 NUBP2Q9Y5Y2 271 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 MYH7BA7E2Y1 1941 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 MYO9BQ13459 2157 aa2.93□□□□□ -1.94
SCFD1-208ENST00000553278 UBR2Q8IWV8 1755 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 DENND4CQ5VZ89 1909 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 OR2T1O43869 369 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 CLPSP04118 112 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 SCGB1A1P11684 91 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 CRYGAP11844 174 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 PEBP1P30086 187 aaKnown RBP2.92□□□□□ -1.94
SCFD1-208ENST00000553278 RTL8BQ17RB0 113 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 LRRC28Q86X40 367 aaPredicted RBP2.92□□□□□ -1.94
SCFD1-208ENST00000553278 DHFR2Q86XF0 187 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 ANGPTL5Q86XS5 388 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 OR8B3Q8NGG8 313 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 OR9Q1Q8NGQ5 310 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 THEM6Q8WUY1 208 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 ISOC1Q96CN7 298 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 MRPL32Q9BYC8 188 aaKnown RBP2.92□□□□□ -1.94
SCFD1-208ENST00000553278 LAMTOR2Q9Y2Q5 125 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 CPAMD8Q8IZJ3 1885 aa2.92□□□□□ -1.94
SCFD1-208ENST00000553278 CUL9Q8IWT3 2517 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 CAMSAP2Q08AD1 1489 aa2.91□□□□□ -1.94
SCFD1-208ENST00000553278 SDCBPO00560 298 aaPredicted RBP2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms