RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 PEMTQ9UBM1 199 aa10.17□□□□□ -0.78
NUP188-211ENST00000550219 FAM24AA6NFZ4 105 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 A8MZ25 164 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 K7EIM0 57 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 BMPR1BO00238 502 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 OR2J3O76001 311 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 NDUFB8O95169 186 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 ATP5G2Q06055 141 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 TMEM252Q8N6L7 170 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 DYNLRB2Q8TF09 96 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 RETNQ9HD89 108 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 FBXL7Q9UJT9 491 aa10.16□□□□□ -0.78
NUP188-211ENST00000550219 IGSF23A1L1A6 192 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 PPP5D1E7EU14 171 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 SMLR1H3BR10 107 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 SCAF4O95104 1147 aaKnown RBP10.15□□□□□ -0.78
NUP188-211ENST00000550219 MT-CO2P00403 227 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 IFNA4P05014 189 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 METTL15P1P0C7V9 234 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 GPX4P36969 197 aaPredicted RBP10.15□□□□□ -0.78
NUP188-211ENST00000550219 CAV2P51636 162 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 CD81P60033 236 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 CD300CQ08708 224 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 ARL16Q0P5N6 197 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 HAGHQ16775 308 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 OR11H4Q8NGC9 324 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 VN1R17PQ8TDU5 208 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 MISP3Q96FF7 219 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 SLC25A31Q9H0C2 315 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 FNDC4Q9H6D8 234 aaPredicted RBP10.15□□□□□ -0.78
NUP188-211ENST00000550219 EDA2RQ9HAV5 297 aa10.15□□□□□ -0.78
NUP188-211ENST00000550219 IGHV3-23P01764 117 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 EDN2P20800 178 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 FCGR2BP31994 310 aaPredicted RBP10.14□□□□□ -0.79
NUP188-211ENST00000550219 SULT1A1P50225 295 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 EWSR1Q01844 656 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP188-211ENST00000550219 C15orf32Q32M92 178 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 SCARB1Q8WTV0 552 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 CACNG8Q8WXS5 425 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 CXorf58Q96LI9 332 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 AQP10Q96PS8 301 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 ATP6V0BQ99437 205 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 FAM110AQ9BQ89 295 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 TNFSF18Q9UNG2 199 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 SELENOKQ9Y6D0 94 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 S4R3C0 116 aa10.14□□□□□ -0.79
NUP188-211ENST00000550219 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.13□□□□□ -0.79
NUP188-211ENST00000550219 LCE6AA0A183 80 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 RPS10-NUDT3A0A1W2PQS6 291 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 MFSD2BA6NFX1 497 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 HMSDA8MTL9 139 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 FNDC10F2Z333 226 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 C1QBP02746 253 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 RPL12P30050 165 aaKnown RBP10.13□□□□□ -0.79
NUP188-211ENST00000550219 OPRK1P41145 380 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 BAXQ07812 192 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 MLANAQ16655 118 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 GUCA2BQ16661 112 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 CD300EQ496F6 205 aaPredicted RBP10.13□□□□□ -0.79
NUP188-211ENST00000550219 ETFRF1Q6IPR1 90 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 ZNF546Q86UE3 836 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 OR10P1Q8NGE3 313 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 ZNF502Q8TBZ5 544 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 GGACTQ9BVM4 153 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 WFDC10AQ9H1F0 79 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 SIGLEC8Q9NYZ4 499 aa10.13□□□□□ -0.79
NUP188-211ENST00000550219 PAIP2BQ9ULR5 123 aaKnown RBP10.13□□□□□ -0.79
NUP188-211ENST00000550219 DYNC2H1Q8NCM8 4307 aaKnown RBP10.13□□□□□ -0.79
NUP188-211ENST00000550219 FXYD6-FXYD2A0A087WZ82 144 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 TRBV7-1A0A0A6YYK4 115 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 RNF222A6NCQ9 220 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 F8W735 103 aaPredicted RBP10.12□□□□□ -0.79
NUP188-211ENST00000550219 CST7O76096 145 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 S100A11P31949 105 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 DLK1P80370 383 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 NHLH2Q02577 135 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 OR8G2PQ6IF36 304 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 STX12Q86Y82 276 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 TMEM116Q8NCL8 245 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 OR2K2Q8NGT1 345 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 OR4X1Q8NH49 305 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 EEF1AKMT3Q96AZ1 226 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 PINX1Q96BK5 328 aaKnown RBP10.12□□□□□ -0.79
NUP188-211ENST00000550219 BSCL2Q96G97 398 aaPredicted RBP10.12□□□□□ -0.79
NUP188-211ENST00000550219 TXN2Q99757 166 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 MRPL36Q9P0J6 103 aaKnown RBP10.12□□□□□ -0.79
NUP188-211ENST00000550219 HSPB11Q9Y547 144 aa10.12□□□□□ -0.79
NUP188-211ENST00000550219 IGHV3-21A0A0B4J1V1 117 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 OR2C1O95371 312 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 CD7P09564 240 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 MFAP4P55083 255 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 GAMTQ14353 236 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 VWC2Q2TAL6 325 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 FAM209BQ5JX69 171 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 ACOT7LQ6ZUV0 252 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 SLC16A13Q7RTY0 426 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 DEFB125Q8N687 156 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 CCDC140Q96MF4 163 aa10.11□□□□□ -0.79
NUP188-211ENST00000550219 C21orf62Q9NYP8 219 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms