RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 IGLC1P0CG04 106 aa13.52□□□□□ -0.25
LETMD1-220ENST00000549686 RPL29P47914 159 aaKnown RBP13.52□□□□□ -0.25
LETMD1-220ENST00000549686 SPSB3Q6PJ21 355 aa13.52□□□□□ -0.25
LETMD1-220ENST00000549686 TEX261Q6UWH6 196 aa13.52□□□□□ -0.25
LETMD1-220ENST00000549686 OR5AU1Q8NGC0 362 aa13.52□□□□□ -0.25
LETMD1-220ENST00000549686 OR2G3Q8NGZ4 309 aa13.52□□□□□ -0.25
LETMD1-220ENST00000549686 WIPF2Q8TF74 440 aaPredicted RBP13.52□□□□□ -0.25
LETMD1-220ENST00000549686 GGTLC1Q9BX51 225 aa13.52□□□□□ -0.25
LETMD1-220ENST00000549686 IGKV1OR2-108A0A075B7D4 117 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 NUPL2O15504 423 aaKnown RBP13.51□□□□□ -0.25
LETMD1-220ENST00000549686 CFDP00746 253 aaPredicted RBP13.51□□□□□ -0.25
LETMD1-220ENST00000549686 RUNX1Q01196 453 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 CYP2G1PQ6ZSU1 146 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 UBE2E2Q96LR5 201 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 SLC25A32Q9H2D1 315 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 SLC45A2Q9UMX9 530 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 RNF114Q9Y508 228 aa13.51□□□□□ -0.25
LETMD1-220ENST00000549686 IGKV1D-37A0A075B6S9 117 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.5□□□□□ -0.25
LETMD1-220ENST00000549686 UMAD1C9J7I0 102 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 F8W735 103 aaPredicted RBP13.5□□□□□ -0.25
LETMD1-220ENST00000549686 MBP02144 154 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 RAB5CP51148 216 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF343Q6P1L6 599 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF767PQ75MW2 155 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF491Q8N8L2 437 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 RSG1Q9BU20 258 aa13.5□□□□□ -0.25
LETMD1-220ENST00000549686 TSPAN15O95858 294 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 CLEC3BP05452 202 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PRR20EP86478 221 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PRR20CP86479 221 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PRR20DP86480 221 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PRR20BP86481 221 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PRR20AP86496 221 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 DEFA5Q01523 94 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 FOXL1Q12952 345 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PXDC1Q5TGL8 231 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 C10orf99Q6UWK7 81 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF680Q8NEM1 530 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 TMED6Q8WW62 240 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 CCDC140Q96MF4 163 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 SH3BGRL3Q9H299 93 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 PXMP4Q9Y6I8 212 aa13.49□□□□□ -0.25
LETMD1-220ENST00000549686 TGOLN2O43493 480 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 TOMM40O96008 361 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 IGKV1-17P01599 117 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 RPLP1P05386 114 aaKnown RBP13.48□□□□□ -0.25
LETMD1-220ENST00000549686 CTSGP08311 255 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 GPR183P32249 361 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 PROK1P58294 105 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 B2MP61769 119 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 RELQ04864 619 aaPredicted RBP13.48□□□□□ -0.25
LETMD1-220ENST00000549686 KIAA0141Q14154 515 aaPredicted RBP13.48□□□□□ -0.25
LETMD1-220ENST00000549686 AKR1C8PQ5T2L2 129 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 CLEC19AQ6UXS0 136 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 Q6ZRG5 221 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 STPG3Q8N7X2 389 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 BPIFCQ8NFQ6 507 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 LRRC20Q8TCA0 184 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 UBQLN2Q9UHD9 624 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 S4R3C0 116 aa13.48□□□□□ -0.25
LETMD1-220ENST00000549686 OR2T8A6NH00 312 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 IGHV3-23P01764 117 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 LGALS1P09382 135 aaKnown RBP13.47□□□□□ -0.25
LETMD1-220ENST00000549686 RD3LP0DJH9 198 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 CDX1P47902 265 aaPredicted RBP13.47□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF616Q08AN1 781 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 ACOT6Q3I5F7 207 aaPredicted RBP13.47□□□□□ -0.25
LETMD1-220ENST00000549686 TIGITQ495A1 244 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 FFAR4Q5NUL3 377 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 ALKAL2Q6UX46 152 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 DPPA3Q6W0C5 159 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 Q8WTZ3 238 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 C19orf24Q9BVV8 132 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 SLC39A9Q9NUM3 307 aa13.47□□□□□ -0.25
LETMD1-220ENST00000549686 RGS13O14921 159 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 IGHV3-11P01762 117 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 SULT1A2P50226 295 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 IFITM2Q01629 132 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF90Q03938 601 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 MIC13Q5XKP0 118 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 ZNF600Q6ZNG1 722 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 LCNL1Q6ZST4 164 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 S100A7AQ86SG5 101 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 OR51G1Q8NGK1 321 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 RNF141Q8WVD5 230 aa13.46□□□□□ -0.25
LETMD1-220ENST00000549686 PEF1Q9UBV8 284 aaKnown RBP13.46□□□□□ -0.25
LETMD1-220ENST00000549686 LINC00869P0C866 280 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 PSG1P11464 419 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 M6PRP20645 277 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 ADMP35318 185 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 ARL3P36405 182 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 PLP1P60201 277 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 TMEM41BQ5BJD5 291 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 TMEM182Q6ZP80 229 aaPredicted RBP13.45□□□□□ -0.26
LETMD1-220ENST00000549686 OR1L4Q8NGR5 311 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 C4orf3Q8WVX3 66 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 PFDN5Q99471 154 aa13.45□□□□□ -0.26
LETMD1-220ENST00000549686 ELOA3CA0A087WX78 387 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 947.6 ms