RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 TCRBV4S1A1TA0A5B7 111 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 IGLC1P0CG04 106 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 CAMLGP49069 296 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 KIAA0141Q14154 515 aaPredicted RBP12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 LCNL1Q6ZST4 164 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 HSD17B11Q8NBQ5 300 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 CCDC140Q96MF4 163 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 GINS3Q9BRX5 216 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 NPCDR1Q9BY65 106 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 ARV1Q9H2C2 271 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 MRPL36Q9P0J6 103 aaKnown RBP12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 TIMM9Q9Y5J7 89 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 S4R3C0 116 aa12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 NIPBLQ6KC79 2804 aaeCLIP12.28□□□□□ -0.44
TRAFD1-203ENST00000547063 NF1P21359 2839 aa12.27□□□□□ -0.44
TRAFD1-203ENST00000547063 OR2T8A6NH00 312 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 AGPAT2O15120 278 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 CFDP00746 253 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 IGHV3-23P01764 117 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 CLEC3BP05452 202 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 LGALS1P09382 135 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 GPR183P32249 361 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 YPEL3P61236 119 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 RELQ04864 619 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 KHDC1LQ5JSQ8 128 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 CLEC19AQ6UXS0 136 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 PSMG3Q9BT73 122 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 PEF1Q9UBV8 284 aaKnown RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 BOLA1Q9Y3E2 137 aa12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 TSSC4Q9Y5U2 329 aaPredicted RBP12.27□□□□□ -0.45
TRAFD1-203ENST00000547063 IGKV1OR2-108A0A075B7D4 117 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 F8W735 103 aaPredicted RBP12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 TGOLN2O43493 480 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 IGHV3-11P01762 117 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 ARL3P36405 182 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 RPL29P47914 159 aaKnown RBP12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 SERF2P84101 59 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 CYP2G1PQ6ZSU1 146 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 PRIMA1Q86XR5 153 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 C4orf3Q8WVX3 66 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 TMEM158Q8WZ71 300 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 ST8SIA2Q92186 375 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 PHYHIPLQ96FC7 376 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 MGST2Q99735 147 aa12.26□□□□□ -0.45
TRAFD1-203ENST00000547063 IGKV1D-37A0A075B6S9 117 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 IGKV1-17P01599 117 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 CTSGP08311 255 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 SEC11BP0C7V7 166 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 ATP6V0CP27449 155 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 RUNX1Q01196 453 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 ZNF616Q08AN1 781 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 TCTEX1D4Q5JR98 221 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 BPIFCQ8NFQ6 507 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 Q8WTZ3 238 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 GGTLC1Q9BX51 225 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 SLC45A2Q9UMX9 530 aa12.25□□□□□ -0.45
TRAFD1-203ENST00000547063 NUDT19A8MXV4 375 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 GGCTO75223 188 aaKnown RBP12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 TSPAN15O95858 294 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 TOMM40O96008 361 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 RD3LP0DJH9 198 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 SPP1P10451 314 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 CD28P10747 220 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 KRTAP24-1Q3LI83 254 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 TIGITQ495A1 244 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 AWAT1Q58HT5 328 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 PXDC1Q5TGL8 231 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 ZNF600Q6ZNG1 722 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 Q6ZRG5 221 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 OR2G3Q8NGZ4 309 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 RSG1Q9BU20 258 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 GNB4Q9HAV0 340 aa12.24□□□□□ -0.45
TRAFD1-203ENST00000547063 ANKRD34BA5PLL1 514 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 I3L521 148 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 MBP02144 154 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 HSPB1P04792 205 aaKnown RBP12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 ADMP35318 185 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 B2MP61769 119 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 S100A7AQ86SG5 101 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 KLHL30-AS1Q8NEE0 82 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 OR51G1Q8NGK1 321 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 OR5B12Q96R08 314 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 CITED2Q99967 270 aaPredicted RBP12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 CHRDL1Q9BU40 450 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 SLC25A32Q9H2D1 315 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 PXMP4Q9Y6I8 212 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 ZFHX3Q15911 3703 aa12.23□□□□□ -0.45
TRAFD1-203ENST00000547063 UMAD1C9J7I0 102 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 PSG1P11464 419 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 ZP3P21754 424 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 S100A7P31151 101 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 PRR20EP86478 221 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 PRR20CP86479 221 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 PRR20DP86480 221 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 PRR20BP86481 221 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 PRR20AP86496 221 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 ZNF90Q03938 601 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 NDUFA11Q86Y39 141 aa12.22□□□□□ -0.45
TRAFD1-203ENST00000547063 STPG3Q8N7X2 389 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms