RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FAM159AQ6UWV7 190 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 LYPD1Q8N2G4 141 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 VOPP1Q96AW1 172 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 PYGO2Q9BRQ0 406 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 SLC25A39Q9BZJ4 359 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-212ENST00000546744 KIAA1671Q9BY89 1806 aa10.66□□□□□ -0.7
PTCH1-212ENST00000546744 SIVA1O15304 175 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 PSG3Q16557 428 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 HES7Q9BYE0 225 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 CHCHD2Q9Y6H1 151 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-212ENST00000546744 IGLV3-12A0A075B6K2 115 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 IGHV3-21A0A0B4J1V1 117 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 ZNF815PA8K554 130 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 ZIC3O60481 467 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 CD55P08174 381 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 CD300EQ496F6 205 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-212ENST00000546744 S100A7L2Q5SY68 101 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 Q6ZT83 130 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 MOB4Q9Y3A3 225 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 CHTOPQ9Y3Y2 248 aaKnown RBP10.65□□□□□ -0.7
PTCH1-212ENST00000546744 LINC00312Q9Y6C7 94 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 K7EP34 96 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 AGFG2O95081 481 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 RPL39P5Q59GN2 51 aa10.65□□□□□ -0.7
PTCH1-212ENST00000546744 A0A087X0K7 114 aa10.65□□□□□ -0.71
PTCH1-212ENST00000546744 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.71
PTCH1-212ENST00000546744 FAM231DQ6ZW35 169 aa10.65□□□□□ -0.71
PTCH1-212ENST00000546744 RTN4RL2Q86UN3 420 aa10.65□□□□□ -0.71
PTCH1-212ENST00000546744 OR13A1Q8NGR1 328 aa10.65□□□□□ -0.71
PTCH1-212ENST00000546744 MYLKQ15746 1914 aa10.65□□□□□ -0.71
PTCH1-212ENST00000546744 TRAV5A0A0B4J249 113 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 TAL2Q16559 108 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 LCN12Q6JVE5 192 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 EEF1AKMT3Q96AZ1 226 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 FBXL7Q9UJT9 491 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 FOXI3A8MTJ6 420 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-212ENST00000546744 NUP35Q8NFH5 326 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 VKORC1Q9BQB6 163 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 ZNF492Q9P255 531 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 IGKV1-5P01602 117 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 TFF2Q03403 129 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 PRR7Q8TB68 274 aa10.64□□□□□ -0.71
PTCH1-212ENST00000546744 LOXL3P58215 753 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 RNF182Q8N6D2 247 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 C8orf46Q8TAG6 207 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 C18orf32Q8TCD1 76 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 TGFBR3LH3BV60 316 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 COX6A1P12074 109 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 CCL4P13236 92 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 PDLIM4P50479 330 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 MORN3Q6PF18 240 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-212ENST00000546744 PPDPFLQ8WWR9 84 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 CRIM1Q9NZV1 1036 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 ZNF319Q9P2F9 582 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 R4GN57 208 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 LOC105371242A0A075B767 164 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 A0A087WV48 116 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 PPIAL4CA0A0B4J2A2 164 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 PPIAL4GP0DN37 164 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 IL15RAQ13261 267 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 MORN2Q502X0 79 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 OVOL2Q9BRP0 275 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 TP53BP1Q12888 1972 aaPredicted RBP10.63□□□□□ -0.71
PTCH1-212ENST00000546744 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 IGHV1-24A0A0C4DH33 117 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 hDV102S1A0JD36 115 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 NDUFA3O95167 84 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 SPINK2P20155 84 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 GFRA1P56159 465 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 GCSAMLQ5JQS6 135 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 PLEKHB2Q96CS7 222 aa10.63□□□□□ -0.71
PTCH1-212ENST00000546744 COL4A4P53420 1690 aaPredicted RBP10.62□□□□□ -0.71
PTCH1-212ENST00000546744 COX8AP10176 69 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 SRSF6Q13247 344 aaKnown RBP10.62□□□□□ -0.71
PTCH1-212ENST00000546744 LAGE3Q14657 143 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 C21orf62Q9NYP8 219 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 IGHV2-70DA0A0C4DH43 119 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 Q6ZWC4 215 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 TMEM101Q96IK0 257 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 DEPPQ9NTK1 212 aa10.62□□□□□ -0.71
PTCH1-212ENST00000546744 IGKV1-12A0A0C4DH73 117 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 J3KRW8 73 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 IGKV1D-12P01611 117 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 FAM106AQ4KMX7 169 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 PSMB11A5LHX3 300 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 LILRA1O75019 489 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 ZNF56Q15929 161 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 C11orf52Q96A22 123 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 TRGV9Q99603 122 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 CHAC1Q9BUX1 264 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 KLF12Q9Y4X4 402 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 AHCTF1Q8WYP5 2266 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 RBMY1BA6NDE4 496 aaKnown RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 RBMY1EA6NEQ0 496 aaKnown RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 RBMY1DP0C7P1 496 aaKnown RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 RBMY1A1P0DJD3 496 aaKnown RBP10.61□□□□□ -0.71
PTCH1-212ENST00000546744 RBMY1CP0DJD4 496 aa10.61□□□□□ -0.71
PTCH1-212ENST00000546744 ICE1Q9Y2F5 2266 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms