RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 EPPK1P58107 5090 aaKnown RBP16.69■□□□□ 0.26
CHD4-214ENST00000545942 H3BMQ9 156 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 SULT1A3P0DMM9 295 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 SULT1A4P0DMN0 295 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 RND2P52198 227 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 PRSS54Q6PEW0 395 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 FAM24BQ8N5W8 94 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 OR1S2Q8NGQ3 325 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 LINC00476Q8WZB0 136 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 GRAMD2BQ96HH9 432 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 MCUBQ9NWR8 336 aa16.69■□□□□ 0.26
CHD4-214ENST00000545942 PLECQ15149 4684 aaKnown RBP16.68■□□□□ 0.26
CHD4-214ENST00000545942 FABP12A6NFH5 140 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 CA1P00915 261 aaPredicted RBP16.68■□□□□ 0.26
CHD4-214ENST00000545942 IGLC1P0CG04 106 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 TNFSF8P32971 234 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 P2RY1P47900 373 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 NMSQ5H8A3 153 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 NOXA1Q86UR1 476 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 STXBP6Q8NFX7 210 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 SOSTQ9BQB4 213 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 PRR13Q9NZ81 148 aa16.68■□□□□ 0.26
CHD4-214ENST00000545942 NXPH3O95157 252 aa16.67■□□□□ 0.26
CHD4-214ENST00000545942 NPY1RP25929 384 aa16.67■□□□□ 0.26
CHD4-214ENST00000545942 OR10J1P30954 320 aa16.67■□□□□ 0.26
CHD4-214ENST00000545942 YPEL3P61236 119 aaPredicted RBP16.67■□□□□ 0.26
CHD4-214ENST00000545942 ETFRF1Q6IPR1 90 aa16.67■□□□□ 0.26
CHD4-214ENST00000545942 Q8WTZ3 238 aa16.67■□□□□ 0.26
CHD4-214ENST00000545942 TMEM170AQ8WVE7 144 aa16.67■□□□□ 0.26
CHD4-214ENST00000545942 KLK5Q9Y337 293 aaPredicted RBP16.67■□□□□ 0.26
CHD4-214ENST00000545942 ALMS1Q8TCU4 4167 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 A0A0B4J2A0 478 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 K7EQG2 157 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 AKR1C4P17516 323 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 STHQ8IWL8 128 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 OR11H2Q8NH07 326 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 MCFD2Q8NI22 146 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 SHPKQ9UHJ6 478 aa16.66■□□□□ 0.26
CHD4-214ENST00000545942 EIF2B2P49770 351 aaKnown RBP16.65■□□□□ 0.26
CHD4-214ENST00000545942 CCR6P51684 374 aa16.65■□□□□ 0.26
CHD4-214ENST00000545942 RBMS2Q15434 407 aaKnown RBP16.65■□□□□ 0.26
CHD4-214ENST00000545942 U3KQE9 123 aa16.65■□□□□ 0.26
CHD4-214ENST00000545942 LY6G6CO95867 125 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 IFNA10P01566 189 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 ANXA3P12429 323 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 SUPT4H1P63272 117 aaKnown RBP16.64■□□□□ 0.25
CHD4-214ENST00000545942 SMCO1Q147U7 214 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 DCANP1Q8TF63 244 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 NPIPB3Q92617 1050 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 C11orf68Q9H3H3 251 aaKnown RBP16.64■□□□□ 0.25
CHD4-214ENST00000545942 HSPB7Q9UBY9 170 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 U3KQ87 197 aa16.64■□□□□ 0.25
CHD4-214ENST00000545942 HELTA6NFD8 242 aa16.63■□□□□ 0.25
CHD4-214ENST00000545942 HNRNPCP07910 306 aaKnown RBP eCLIP16.63■□□□□ 0.25
CHD4-214ENST00000545942 FAUP35544 74 aaKnown RBP16.63■□□□□ 0.25
CHD4-214ENST00000545942 SRPXP78539 464 aa16.63■□□□□ 0.25
CHD4-214ENST00000545942 LYZL2Q7Z4W2 148 aa16.63■□□□□ 0.25
CHD4-214ENST00000545942 LGI3Q8N145 548 aa16.63■□□□□ 0.25
CHD4-214ENST00000545942 DTD1Q8TEA8 209 aa16.63■□□□□ 0.25
CHD4-214ENST00000545942 ACY3Q96HD9 319 aa16.63■□□□□ 0.25
CHD4-214ENST00000545942 ZNF688P0C7X2 276 aa16.62■□□□□ 0.25
CHD4-214ENST00000545942 PHLDA1Q8WV24 401 aaPredicted RBP16.62■□□□□ 0.25
CHD4-214ENST00000545942 PIGBOS1A0A0B4J2F0 54 aa16.61■□□□□ 0.25
CHD4-214ENST00000545942 IL4P05112 153 aa16.61■□□□□ 0.25
CHD4-214ENST00000545942 AP2S1P53680 142 aaPredicted RBP16.61■□□□□ 0.25
CHD4-214ENST00000545942 USF2Q15853 346 aaPredicted RBP16.61■□□□□ 0.25
CHD4-214ENST00000545942 C16orf54Q6UWD8 224 aa16.61■□□□□ 0.25
CHD4-214ENST00000545942 TRPT1Q86TN4 253 aaKnown RBP16.61■□□□□ 0.25
CHD4-214ENST00000545942 GLMPQ8WWB7 406 aa16.61■□□□□ 0.25
CHD4-214ENST00000545942 MFFQ9GZY8 342 aa16.61■□□□□ 0.25
CHD4-214ENST00000545942 TOMM40O96008 361 aa16.6■□□□□ 0.25
CHD4-214ENST00000545942 RD3LP0DJH9 198 aa16.6■□□□□ 0.25
CHD4-214ENST00000545942 AP3S2P59780 193 aa16.6■□□□□ 0.25
CHD4-214ENST00000545942 DHRS2Q13268 280 aa16.6■□□□□ 0.25
CHD4-214ENST00000545942 KLF9Q13886 244 aaPredicted RBP16.6■□□□□ 0.25
CHD4-214ENST00000545942 C11orf45Q8TAV5 145 aa16.6■□□□□ 0.25
CHD4-214ENST00000545942 RBKSQ9H477 322 aa16.6■□□□□ 0.25
CHD4-214ENST00000545942 SPP1P10451 314 aa16.59■□□□□ 0.25
CHD4-214ENST00000545942 PYDC2Q56P42 97 aa16.59■□□□□ 0.25
CHD4-214ENST00000545942 TMEM41BQ5BJD5 291 aa16.59■□□□□ 0.25
CHD4-214ENST00000545942 MORN3Q6PF18 240 aaPredicted RBP16.59■□□□□ 0.25
CHD4-214ENST00000545942 TOMM5Q8N4H5 51 aa16.59■□□□□ 0.25
CHD4-214ENST00000545942 TRIM63Q969Q1 353 aa16.59■□□□□ 0.25
CHD4-214ENST00000545942 KNCNA6PVL3 124 aa16.58■□□□□ 0.24
CHD4-214ENST00000545942 IFNA4P05014 189 aa16.58■□□□□ 0.24
CHD4-214ENST00000545942 ATP5IP56385 69 aaPredicted RBP16.58■□□□□ 0.24
CHD4-214ENST00000545942 NANOS2P60321 138 aaKnown RBP16.58■□□□□ 0.24
CHD4-214ENST00000545942 TMEM128Q5BJH2 165 aa16.58■□□□□ 0.24
CHD4-214ENST00000545942 TMED4Q7Z7H5 227 aa16.58■□□□□ 0.24
CHD4-214ENST00000545942 OR1S1Q8NH92 325 aa16.58■□□□□ 0.24
CHD4-214ENST00000545942 BIRC6Q9NR09 4857 aa16.57■□□□□ 0.24
CHD4-214ENST00000545942 DUXBA0A1W2PPF3 345 aa16.57■□□□□ 0.24
CHD4-214ENST00000545942 GIG44P09565 113 aaPredicted RBP16.57■□□□□ 0.24
CHD4-214ENST00000545942 ACTL10Q5JWF8 245 aa16.57■□□□□ 0.24
CHD4-214ENST00000545942 V9GYH0 126 aa16.57■□□□□ 0.24
CHD4-214ENST00000545942 DEFB4AO15263 64 aa16.56■□□□□ 0.24
CHD4-214ENST00000545942 BUB3O43684 328 aa16.56■□□□□ 0.24
CHD4-214ENST00000545942 PSG1P11464 419 aa16.56■□□□□ 0.24
CHD4-214ENST00000545942 PSMG4Q5JS54 123 aa16.56■□□□□ 0.24
CHD4-214ENST00000545942 FBXL17Q9UF56 701 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms