RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 OR8G2PQ6IF36 304 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 C11orf87Q6NUJ2 197 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 ZNF600Q6ZNG1 722 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 REC114Q7Z4M0 266 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 DLX4Q92988 240 aaPredicted RBP9.01□□□□□ -0.97
SNHG1-221ENST00000544983 DUX3Q96PT4 197 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 SIGLEC8Q9NYZ4 499 aa9.01□□□□□ -0.97
SNHG1-221ENST00000544983 ZMAT5Q9UDW3 170 aaKnown RBP9.01□□□□□ -0.97
SNHG1-221ENST00000544983 A8MWP6 167 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 CFDP00746 253 aaPredicted RBP9□□□□□ -0.97
SNHG1-221ENST00000544983 IGHV3-48P01763 117 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 IGLC1P0CG04 106 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 ADMP35318 185 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 SYNJ2BPP57105 145 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 MLANAQ16655 118 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 ACOT7LQ6ZUV0 252 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 TMEM144Q7Z5S9 345 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 TMEM252Q8N6L7 170 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 OR9G4Q8NGQ1 327 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 NPIPB3Q92617 1050 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 MARC2Q969Z3 335 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 ACY3Q96HD9 319 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 CHRDL1Q9BU40 450 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 RNF126Q9BV68 326 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 NPVFQ9HCQ7 196 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 UFC1Q9Y3C8 167 aa9□□□□□ -0.97
SNHG1-221ENST00000544983 FAM24AA6NFZ4 105 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 ZFP92A6NM28 416 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 H0YIZ8 118 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 K7EMT4 169 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 IGKV1-17P01599 117 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 SLC38A11Q08AI6 406 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 C9orf66Q5T8R8 295 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 THAP8Q8NA92 274 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 Q8WTZ3 238 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 TMEM190Q8WZ59 177 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 TRGV9Q99603 122 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 GINS3Q9BRX5 216 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 DAZ1Q9NQZ3 744 aaKnown RBP8.99□□□□□ -0.97
SNHG1-221ENST00000544983 OR5AC2Q9NZP5 309 aa8.99□□□□□ -0.97
SNHG1-221ENST00000544983 ZNF320A2RRD8 509 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 SEC14L6B5MCN3 397 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 CST7O76096 145 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 RD3LP0DJH9 198 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 BMI1P35226 326 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 NUP62P37198 522 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-221ENST00000544983 SELENOTP62341 195 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 AKR1C1Q04828 323 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 RAB31Q13636 194 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 TEPPQ6URK8 271 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 LILRB2Q8N423 598 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 OR2T35Q8NGX2 323 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 CHAC2Q8WUX2 184 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 WDR89Q96FK6 387 aaPredicted RBP8.98□□□□□ -0.97
SNHG1-221ENST00000544983 MRPL36Q9P0J6 103 aaKnown RBP8.98□□□□□ -0.97
SNHG1-221ENST00000544983 MBD2Q9UBB5 411 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 PFDN2Q9UHV9 154 aa8.98□□□□□ -0.97
SNHG1-221ENST00000544983 IGSF23A1L1A6 192 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 YIF1AO95070 293 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 TOMM40O96008 361 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 RPL12P30050 165 aaKnown RBP8.97□□□□□ -0.97
SNHG1-221ENST00000544983 S100A7P31151 101 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 EWSR1Q01844 656 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNHG1-221ENST00000544983 VWC2Q2TAL6 325 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 TMEM217Q8N7C4 229 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 TMEM147Q9BVK8 224 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 ZC4H2Q9NQZ6 224 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 UQCC1Q9NVA1 299 aa8.97□□□□□ -0.97
SNHG1-221ENST00000544983 MRPL27Q9P0M9 148 aaKnown RBP8.97□□□□□ -0.97
SNHG1-221ENST00000544983 PUS1Q9Y606 427 aaKnown RBP eCLIP8.97□□□□□ -0.97
SNHG1-221ENST00000544983 NOTCH1P46531 2555 aa8.96□□□□□ -0.97
SNHG1-221ENST00000544983 TRAV14DV4A0A0A6YYC5 116 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 SMCO3A2RU48 225 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 C2orf70A6NJV1 201 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 MPDU1O75352 247 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 DFFBO76075 338 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 CD5P06127 495 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 ARL16Q0P5N6 197 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 TIGITQ495A1 244 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 TOMM20LQ6UXN7 152 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 S100A7AQ86SG5 101 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 HAPLN4Q86UW8 402 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
SNHG1-221ENST00000544983 OR51G1Q8NGK1 321 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 OR2K2Q8NGT1 345 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 TECRQ9NZ01 308 aaKnown RBP8.96□□□□□ -0.98
SNHG1-221ENST00000544983 HSPB11Q9Y547 144 aa8.96□□□□□ -0.98
SNHG1-221ENST00000544983 IGKV1D-37A0A075B6S9 117 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 IGKV1OR2-108A0A075B7D4 117 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 IGHV3-35A0A0C4DH35 117 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 TMEM213A2RRL7 107 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 SAP30O75446 220 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 CCNKO75909 580 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 CSN3P07498 182 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 C8orf88P0DMB2 117 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 PSG1P11464 419 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 IGLL1P15814 213 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 CBLN1P23435 193 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 NHLH2Q02577 135 aa8.95□□□□□ -0.98
SNHG1-221ENST00000544983 PXDC1Q5TGL8 231 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms