RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 WFDC9Q8NEX5 89 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 OR1S2Q8NGQ3 325 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 SLC25A31Q9H0C2 315 aa11.09□□□□□ -0.63
TNFRSF1A-216ENST00000543995 YIF1AO95070 293 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 HBG1P69891 147 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 HBG2P69892 147 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 DLK1P80370 383 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 ARL16Q0P5N6 197 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TIGITQ495A1 244 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 LILRB2Q8N423 598 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 OR9G4Q8NGQ1 327 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 OR2T35Q8NGX2 323 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 CHAC2Q8WUX2 184 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 RCC1LQ96I51 464 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 MCRIP2Q9BUT9 160 aaKnown RBP11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 C20orf24Q9BUV8 137 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 PEMTQ9UBM1 199 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TRRAPQ9Y4A5 3859 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 DNHD1Q96M86 4753 aa11.08□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TRAV14DV4A0A0A6YYC5 116 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 NDUFA4O00483 81 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 IGLL1P15814 213 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 SLC38A11Q08AI6 406 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 ZNF600Q6ZNG1 722 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 HAPLN4Q86UW8 402 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 ELOVL1Q9BW60 279 aa11.07□□□□□ -0.64
TNFRSF1A-216ENST00000543995 IGHV3OR16-8A0A075B7F1 116 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 SEC14L6B5MCN3 397 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 LGALS9O00182 355 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 IGKV1-17P01599 117 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 S100A11P31949 105 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 EWSR1Q01844 656 aaKnown RBP eCLIP11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 NHLH2Q02577 135 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 UNQ9165/PRO28630Q6UXU0 137 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 REC114Q7Z4M0 266 aa11.06□□□□□ -0.64
TNFRSF1A-216ENST00000543995 SAP30O75446 220 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 LYL1P12980 280 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 RPL12P30050 165 aaKnown RBP11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 BAXQ07812 192 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 Q5BKY6 102 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TMEM144Q7Z5S9 345 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TMEM190Q8WZ59 177 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 GGACTQ9BVM4 153 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 NPVFQ9HCQ7 196 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 UFC1Q9Y3C8 167 aa11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 PUS1Q9Y606 427 aaKnown RBP eCLIP11.05□□□□□ -0.64
TNFRSF1A-216ENST00000543995 FNDC10F2Z333 226 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 FABP1P07148 127 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 NUP62P37198 522 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 YPEL3P61236 119 aaPredicted RBP11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 C9orf66Q5T8R8 295 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 THAP8Q8NA92 274 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 Q8WTZ3 238 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 IGKV1D-37A0A075B6S9 117 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 IGKV1OR2-108A0A075B7D4 117 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 FXYD6-FXYD2A0A087WZ82 144 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TOMM40O96008 361 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 RD3LP0DJH9 198 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 ZNF90Q03938 601 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 ATP6V1FQ16864 119 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TM4SF20Q53R12 229 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 OXLD1Q5BKU9 147 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TOMM20LQ6UXN7 152 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 OR5C1Q8NGR4 320 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TRGV9Q99603 122 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TMEM147Q9BVK8 224 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 GPR61Q9BZJ8 451 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 DAZ1Q9NQZ3 744 aaKnown RBP11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 UQCC1Q9NVA1 299 aa11.04□□□□□ -0.64
TNFRSF1A-216ENST00000543995 UBE2L5PA0A1B0GUS4 154 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 C2orf70A6NJV1 201 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 A8MWP6 167 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 SMLR1H3BR10 107 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 ZNF207O43670 478 aaKnown RBP11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 PSG1P11464 419 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 CLINT1Q14677 625 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TEPPQ6URK8 271 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 GINS3Q9BRX5 216 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 HSPB11Q9Y547 144 aa11.03□□□□□ -0.64
TNFRSF1A-216ENST00000543995 TMEM213A2RRL7 107 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CSN3P07498 182 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ELLP55199 621 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 OR2F1Q13607 317 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IL34Q6ZMJ4 242 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ZNF546Q86UE3 836 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 INO80EQ8NBZ0 244 aaPredicted RBP11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 OR51G1Q8NGK1 321 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ZNF414Q96IQ9 312 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ZFAND3Q9H8U3 227 aa11.02□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CMYA5Q8N3K9 4069 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 G3V4G9 280 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 IL4P05112 153 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 FOLR2P14207 255 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 EDN2P20800 178 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CBLN1P23435 193 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 INSL3P51460 131 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 CD300CQ08708 224 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 DYNLRB2Q8TF09 96 aa11.01□□□□□ -0.65
TNFRSF1A-216ENST00000543995 ST6GAL2Q96JF0 529 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms