RNA–Protein interactions for RNA: ENST00000543552.5

RTN3-213, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 529 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-213ENST00000543552 NOL3O60936 208 aaKnown RBP9.62□□□□□ -0.87
RTN3-213ENST00000543552 IGKV1-17P01599 117 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 SPP1P10451 314 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 AP2S1P53680 142 aaPredicted RBP9.62□□□□□ -0.87
RTN3-213ENST00000543552 FAAP20Q6NZ36 180 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 MORN3Q6PF18 240 aaPredicted RBP9.62□□□□□ -0.87
RTN3-213ENST00000543552 Q6ZRM9 215 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 LILRB2Q8N423 598 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 OR4C16Q8NGL9 310 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 IL22RA2Q969J5 263 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 RSL24D1Q9UHA3 163 aaKnown RBP9.62□□□□□ -0.87
RTN3-213ENST00000543552 SCP2D1Q9UJQ7 156 aa9.62□□□□□ -0.87
RTN3-213ENST00000543552 K7EQG2 157 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 CTDSP2O14595 271 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 GSTZ1O43708 216 aaPredicted RBP9.61□□□□□ -0.87
RTN3-213ENST00000543552 SULT1A3P0DMM9 295 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 SULT1A4P0DMN0 295 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 NPY1RP25929 384 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 OR10J1P30954 320 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 NUP62P37198 522 aaPredicted RBP9.61□□□□□ -0.87
RTN3-213ENST00000543552 ALDH3B2P48448 385 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 RND2P52198 227 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 YPEL3P61236 119 aaPredicted RBP9.61□□□□□ -0.87
RTN3-213ENST00000543552 SPCS2Q15005 226 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 TIGITQ495A1 244 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 CLVS1Q8IUQ0 354 aaPredicted RBP9.61□□□□□ -0.87
RTN3-213ENST00000543552 SELENOHQ8IZQ5 122 aaKnown RBP9.61□□□□□ -0.87
RTN3-213ENST00000543552 CENPSQ8N2Z9 138 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 MRPL36Q9P0J6 103 aaKnown RBP9.61□□□□□ -0.87
RTN3-213ENST00000543552 GPR132Q9UNW8 380 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 TMEM56-RWDD3S4R434 201 aa9.61□□□□□ -0.87
RTN3-213ENST00000543552 KMT2AQ03164 3969 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 HNRNPCP07910 306 aaKnown RBP eCLIP9.6□□□□□ -0.873e-6■■■□□ 17
RTN3-213ENST00000543552 ZNF688P0C7X2 276 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 IGLC1P0CG04 106 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 ANXA3P12429 323 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 TMBIM6P55061 237 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 TCTAP57738 103 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 SRPXP78539 464 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 LGALS9CQ6DKI2 356 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 PRSS54Q6PEW0 395 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 FAM24BQ8N5W8 94 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 LHFPL5Q8TAF8 219 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 GPR146Q96CH1 333 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 FBXL17Q9UF56 701 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 PFDN2Q9UHV9 154 aa9.6□□□□□ -0.87
RTN3-213ENST00000543552 ANKRD20A5PA0PJZ0 165 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 CCR6P51684 374 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 ATP5IP56385 69 aaPredicted RBP9.59□□□□□ -0.87
RTN3-213ENST00000543552 NANOS2P60321 138 aaKnown RBP9.59□□□□□ -0.87
RTN3-213ENST00000543552 SNRPD3P62318 126 aaKnown RBP9.59□□□□□ -0.87
RTN3-213ENST00000543552 DHRS2Q13268 280 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 MLANAQ16655 118 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 NMSQ5H8A3 153 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 TRPT1Q86TN4 253 aaKnown RBP9.59□□□□□ -0.87
RTN3-213ENST00000543552 C2CD4CQ8TF44 421 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 HRH4Q9H3N8 390 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 MCUBQ9NWR8 336 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 U3KQ87 197 aa9.59□□□□□ -0.87
RTN3-213ENST00000543552 A0A0B4J2A0 478 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 C11orf94C9JXX5 98 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 IFNA10P01566 189 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 IL4P05112 153 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 RD3LP0DJH9 198 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 MIFP14174 115 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 FAUP35544 74 aaKnown RBP9.58□□□□□ -0.88
RTN3-213ENST00000543552 NUTF2P61970 127 aaKnown RBP9.58□□□□□ -0.88
RTN3-213ENST00000543552 SMCO1Q147U7 214 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 DYNC2LI1Q8TCX1 351 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 DCANP1Q8TF63 244 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 GLMPQ8WWB7 406 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 ACY3Q96HD9 319 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 SEPSECSQ9HD40 501 aaKnown RBP9.58□□□□□ -0.88
RTN3-213ENST00000543552 SHPKQ9UHJ6 478 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 U3KQE9 123 aa9.58□□□□□ -0.88
RTN3-213ENST00000543552 TOMM40O96008 361 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 FABP1P07148 127 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 AP3S2P59780 193 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 PSMG4Q5JS54 123 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 ACTL10Q5JWF8 245 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 C16orf54Q6UWD8 224 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 LGI3Q8N145 548 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 Q8NAQ8 132 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 DTD1Q8TEA8 209 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 NPIPB3Q92617 1050 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 C1QTNF4Q9BXJ3 329 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 NRN1Q9NPD7 142 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 HSPB7Q9UBY9 170 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 FRAS1Q86XX4 4008 aa9.57□□□□□ -0.88
RTN3-213ENST00000543552 FABP12A6NFH5 140 aa9.56□□□□□ -0.88
RTN3-213ENST00000543552 NXPH3O95157 252 aa9.56□□□□□ -0.88
RTN3-213ENST00000543552 AKR1C4P17516 323 aa9.56□□□□□ -0.88
RTN3-213ENST00000543552 SIGLEC15Q6ZMC9 328 aa9.56□□□□□ -0.88
RTN3-213ENST00000543552 IGHV4-28A0A0C4DH34 117 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 DUXBA0A1W2PPF3 345 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 ZNF705EA8MWA4 302 aaPredicted RBP9.55□□□□□ -0.88
RTN3-213ENST00000543552 FAM90A26D6RGX4 464 aa9.55□□□□□ -0.88
RTN3-213ENST00000543552 DEFB4AO15263 64 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms