RNA–Protein interactions for RNA: ENST00000543205.1

CLIP1-217, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,018 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-217ENST00000543205 NEXN-AS1Q8NBZ9 246 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 PACRGQ96M98 296 aaPredicted RBP3.99□□□□□ -1.77
CLIP1-217ENST00000543205 NEURL2Q9BR09 285 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 MAP6D1Q9H9H5 199 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 C3orf85A0A1B0GTC6 90 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 CREBL2O60519 120 aaPredicted RBP3.99□□□□□ -1.77
CLIP1-217ENST00000543205 CNIH1O95406 144 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 IGHG2P01859 326 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 HLA-DRB1P01911 266 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 BRWD1-AS2P59051 145 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 TAS2R31P59538 309 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 GNB1P62873 340 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 THOC7Q6I9Y2 204 aaKnown RBP3.99□□□□□ -1.77
CLIP1-217ENST00000543205 PPP1R27Q86WC6 154 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 APRG1Q8IVJ8 170 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 SGPP2Q8IWX5 399 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 VKORC1L1Q8N0U8 176 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 Q8N1X5 172 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 VSTM2AQ8TAG5 236 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 DTD1Q8TEA8 209 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 HSPB9Q9BQS6 159 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 SLC25A21Q9BQT8 299 aaPredicted RBP3.99□□□□□ -1.77
CLIP1-217ENST00000543205 RTBDNQ9BSG5 229 aaPredicted RBP3.99□□□□□ -1.77
CLIP1-217ENST00000543205 ZC4H2Q9NQZ6 224 aa3.99□□□□□ -1.77
CLIP1-217ENST00000543205 CUBNO60494 3623 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 MGAM2Q2M2H8 2515 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 IGHV7-81A0A0B4J1V7 117 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 LINC01548A6NM66 108 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 H0Y980 276 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 FCN1O00602 326 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 LYRM1O43325 122 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 ATG12O94817 140 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 OR2A4O95047 310 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 S1PR2O95136 353 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 CA2P00918 260 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 SAA1P0DJI8 122 aaPredicted RBP3.98□□□□□ -1.77
CLIP1-217ENST00000543205 AKR1C4P17516 323 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 VDAC1P21796 283 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 CCR6P51684 374 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 SEC61BP60468 96 aaKnown RBP3.98□□□□□ -1.77
CLIP1-217ENST00000543205 SLC35B1P78383 322 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 FXYD3Q14802 87 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 RBMS2Q15434 407 aaKnown RBP3.98□□□□□ -1.77
CLIP1-217ENST00000543205 TRIM16LQ309B1 348 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 FFAR4Q5NUL3 377 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 LINC00336Q6ZUF6 198 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 TMED4Q7Z7H5 227 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 OR4A5Q8NH83 315 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 OR2A7Q96R45 310 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 OR51J1Q9H342 316 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 NRN1Q9NPD7 142 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 PARP11Q9NR21 331 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 COMMD9Q9P000 198 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 LINC00527Q9UJ94 153 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 VSIG4Q9Y279 399 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 KCNIP3Q9Y2W7 256 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 V9GYY9 64 aa3.98□□□□□ -1.77
CLIP1-217ENST00000543205 hDV102S1A0JD36 115 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PSMB11A5LHX3 300 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 CRYM-AS1A6NIL9 109 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 ATP6V0E1O15342 81 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PLA2G10O15496 165 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 UPK1BO75841 260 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 KBTBD11O94819 623 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 NDUFB6O95139 128 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 KRASP01116 189 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 OR5AC1P0C628 307 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 NHLRC4P0CG21 123 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-217ENST00000543205 MYOD1P15172 320 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 G6PCP35575 357 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PROK1P58294 105 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 DHODHQ02127 395 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 TMEM267Q0VDI3 215 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PRSS8Q16651 343 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 SP6Q3SY56 376 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 ZNF585BQ52M93 769 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 Q6ZNX1 250 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PUSL1Q8N0Z8 303 aaKnown RBP3.97□□□□□ -1.77
CLIP1-217ENST00000543205 STPG2Q8N412 459 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 GRPEL2Q8TAA5 225 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 ARPC1AQ92747 370 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 NOL4LQ96MY1 436 aaPredicted RBP3.97□□□□□ -1.77
CLIP1-217ENST00000543205 TP53RKQ96S44 253 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PHB2Q99623 299 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 NAA60Q9H7X0 242 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 BET1LQ9NYM9 111 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 TRAV41A0A0B4J266 112 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 TMEM213A2RRL7 107 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 SNAPC5O75971 98 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 FABP1P07148 127 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 BTCP35070 178 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 MAS1LP35410 378 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 DEFA1P59665 94 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 DEFA3P59666 94 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 RPL8P62917 257 aaKnown RBP3.97□□□□□ -1.77
CLIP1-217ENST00000543205 ASAH1Q13510 395 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 ECSCRQ19T08 205 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 TMEM128Q5BJH2 165 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 PIK3CD-AS1Q5SR53 167 aa3.97□□□□□ -1.77
CLIP1-217ENST00000543205 UNQ5815/PRO19632Q6UWF5 114 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms