RNA–Protein interactions for RNA: ENST00000542830.5

LTBR-210, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 539 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-210ENST00000542830 TRAV2A0A0B4J234 112 aa12.93□□□□□ -0.34
LTBR-210ENST00000542830 NXPH3O95157 252 aa12.93□□□□□ -0.34
LTBR-210ENST00000542830 IGKV1-17P01599 117 aa12.93□□□□□ -0.34
LTBR-210ENST00000542830 PRSS54Q6PEW0 395 aa12.93□□□□□ -0.34
LTBR-210ENST00000542830 WFDC3Q8IUB2 231 aa12.93□□□□□ -0.34
LTBR-210ENST00000542830 DNASE2O00115 360 aaPredicted RBP12.92□□□□□ -0.34
LTBR-210ENST00000542830 SPRY2O43597 315 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 DFFBO76075 338 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 IFNA10P01566 189 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 APOHP02749 345 aaPredicted RBP12.92□□□□□ -0.34
LTBR-210ENST00000542830 IGLC1P0CG04 106 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 RPL35AP18077 110 aaKnown RBP12.92□□□□□ -0.34
LTBR-210ENST00000542830 CRYBB3P26998 211 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 RND2P52198 227 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 ATP5IP56385 69 aaPredicted RBP12.92□□□□□ -0.34
LTBR-210ENST00000542830 RPL11P62913 178 aaKnown RBP12.92□□□□□ -0.34
LTBR-210ENST00000542830 TIGITQ495A1 244 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 GBGT1Q8N5D6 347 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 DTD1Q8TEA8 209 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 Q8WTZ3 238 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 MS4A6AQ9H2W1 248 aa12.92□□□□□ -0.34
LTBR-210ENST00000542830 IGHV3-66A0A0C4DH42 116 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 OR10J1P30954 320 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 YPEL3P61236 119 aaPredicted RBP12.91□□□□□ -0.34
LTBR-210ENST00000542830 APRG1Q8IVJ8 170 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 LILRB2Q8N423 598 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 OR1S1Q8NH92 325 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 TMEM170AQ8WVE7 144 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 GRAMD2BQ96HH9 432 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 MAP6D1Q9H9H5 199 aa12.91□□□□□ -0.34
LTBR-210ENST00000542830 LCE6AA0A183 80 aa12.9□□□□□ -0.34
LTBR-210ENST00000542830 VAMP1P23763 118 aa12.9□□□□□ -0.34
LTBR-210ENST00000542830 DEFB135Q30KP9 77 aa12.9□□□□□ -0.34
LTBR-210ENST00000542830 LRTM2Q8N967 370 aa12.9□□□□□ -0.34
LTBR-210ENST00000542830 SRRQ9GZT4 340 aa12.9□□□□□ -0.34
LTBR-210ENST00000542830 RBKSQ9H477 322 aa12.9□□□□□ -0.34
LTBR-210ENST00000542830 STARD9Q9P2P6 4700 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 SLC25A6P12236 298 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 P2RY1P47900 373 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 INPP1P49441 399 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 EIF2B2P49770 351 aaKnown RBP12.89□□□□□ -0.35
LTBR-210ENST00000542830 RBMS2Q15434 407 aaKnown RBP12.89□□□□□ -0.35
LTBR-210ENST00000542830 NPIPB3Q92617 1050 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 RNF183Q96D59 192 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 CSTL1Q9H114 145 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 TMED3Q9Y3Q3 217 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 CSMD3Q7Z407 3707 aa12.89□□□□□ -0.35
LTBR-210ENST00000542830 TENM2Q9NT68 2774 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 MPTX1A8MV57 137 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 SFT2D2O95562 160 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 IFNA4P05014 189 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 HNRNPCP07910 306 aaKnown RBP eCLIP12.88□□□□□ -0.35
LTBR-210ENST00000542830 CENPSQ8N2Z9 138 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 ACY3Q96HD9 319 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 RABAC1Q9UI14 185 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 SACSQ9NZJ4 4579 aa12.88□□□□□ -0.35
LTBR-210ENST00000542830 HELTA6NFD8 242 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 NAP1L6A6NFF2 107 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 FAM90A26D6RGX4 464 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 PITX3O75364 302 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 MED6O75586 246 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 TOMM40O96008 361 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 DEFB131AP59861 70 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 UBE2MP61081 183 aaKnown RBP12.87□□□□□ -0.35
LTBR-210ENST00000542830 ZNF124Q15973 351 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 TRIQKQ629K1 86 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 U3KQE9 123 aa12.87□□□□□ -0.35
LTBR-210ENST00000542830 IL4P05112 153 aa12.86□□□□□ -0.35
LTBR-210ENST00000542830 RD3LP0DJH9 198 aa12.86□□□□□ -0.35
LTBR-210ENST00000542830 ATF4P18848 351 aaPredicted RBP12.86□□□□□ -0.35
LTBR-210ENST00000542830 GPX4P36969 197 aaPredicted RBP12.86□□□□□ -0.35
LTBR-210ENST00000542830 AP2S1P53680 142 aaPredicted RBP12.86□□□□□ -0.35
LTBR-210ENST00000542830 RAB11AP62491 216 aa12.86□□□□□ -0.35
LTBR-210ENST00000542830 PPP1R1AQ13522 171 aa12.86□□□□□ -0.35
LTBR-210ENST00000542830 LYG2Q86SG7 212 aa12.86□□□□□ -0.35
LTBR-210ENST00000542830 STXBP6Q8NFX7 210 aa12.86□□□□□ -0.35
LTBR-210ENST00000542830 A0A0J9YWU9 116 aa12.85□□□□□ -0.35
LTBR-210ENST00000542830 K7EQG2 157 aa12.85□□□□□ -0.35
LTBR-210ENST00000542830 JTBO76095 146 aa12.85□□□□□ -0.35
LTBR-210ENST00000542830 TMEM217Q8N7C4 229 aa12.85□□□□□ -0.35
LTBR-210ENST00000542830 GATAD1Q8WUU5 269 aa12.85□□□□□ -0.35
LTBR-210ENST00000542830 SLC35E1Q96K37 410 aa12.85□□□□□ -0.35
LTBR-210ENST00000542830 CIB3Q96Q77 187 aaPredicted RBP12.85□□□□□ -0.35
LTBR-210ENST00000542830 NUP62P37198 522 aaPredicted RBP12.84□□□□□ -0.35
LTBR-210ENST00000542830 RPP30P78346 268 aaKnown RBP12.84□□□□□ -0.35
LTBR-210ENST00000542830 USF2Q15853 346 aaPredicted RBP12.84□□□□□ -0.35
LTBR-210ENST00000542830 BAK1Q16611 211 aa12.84□□□□□ -0.35
LTBR-210ENST00000542830 LEMD1Q68G75 181 aa12.84□□□□□ -0.35
LTBR-210ENST00000542830 C16orf54Q6UWD8 224 aa12.84□□□□□ -0.35
LTBR-210ENST00000542830 STHQ8IWL8 128 aa12.84□□□□□ -0.35
LTBR-210ENST00000542830 GLMPQ8WWB7 406 aa12.84□□□□□ -0.35
LTBR-210ENST00000542830 PFDN2Q9UHV9 154 aa12.84□□□□□ -0.35
LTBR-210ENST00000542830 CENPXA8MT69 81 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 NDUFB6O95139 128 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 FABP1P07148 127 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 HOXB5P09067 269 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 PSG1P11464 419 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 FAM24BQ8N5W8 94 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 OR51G1Q8NGK1 321 aa12.83□□□□□ -0.36
LTBR-210ENST00000542830 DCANP1Q8TF63 244 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms