RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 DNHD1Q96M86 4753 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 A0A0U1RQV1 116 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 KANTRA0A1W2PQU2 76 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 GGT3PA6NGU5 568 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 C21orf140B9A014 251 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 C9JQL5 133 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 C11orf94C9JXX5 98 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PPP5D1E7EU14 171 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 CORTO00230 105 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 FAAHO00519 579 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 CREBL2O60519 120 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BKO60814 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 IGLV3-25P01717 112 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 IGHV3-11P01762 117 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BJP06899 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 OR4Q2P0C623 313 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 SFTA3P0C7M3 94 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 CECR9P0C854 216 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 TLX1NBP0CAT3 122 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 OR13C7P0DN81 318 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 SLC25A4P12235 298 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PTHLHP12272 177 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 FABP4P15090 132 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BOP23527 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 OR10J1P30954 320 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BBP33778 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BDP58876 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PPP1CAP62136 330 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BCP62807 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 ZNF235Q14590 738 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST2H2BEQ16778 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 LINC00303Q3SY05 128 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST2H2BFQ5QNW6 126 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 FAM162BQ5T6X4 162 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 SFXN4Q6P4A7 337 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 GUSBP11Q6P575 273 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 FAM231DQ6ZW35 169 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 FAM19A5Q7Z5A7 132 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PRNTQ86SH4 94 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 TOMM5Q8N4H5 51 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 FAM24BQ8N5W8 94 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 C15orf56Q8N910 161 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 Q8N976 141 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 LINC01555Q8NAE3 123 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 GATD1Q8NB37 220 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 DEFB124Q8NES8 71 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 SLC30A7Q8NEW0 376 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 SMIM4Q8WVI0 70 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BHQ93079 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 SFRP2Q96HF1 295 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 REEP6Q96HR9 211 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 OR7D2Q96RA2 312 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BNQ99877 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HIST1H2BMQ99879 126 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PYGO2Q9BRQ0 406 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 NUDT9Q9BW91 350 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PLA2G12AQ9BZM1 189 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 PLEKHF2Q9H8W4 249 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 CBLN4Q9NTU7 201 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 LYRM2Q9NU23 88 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 TVP23BQ9NYZ1 205 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 OR5AC2Q9NZP5 309 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 ZNF230Q9UIE0 474 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 KLF13Q9Y2Y9 288 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 HDGFL3Q9Y3E1 203 aa2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 NUP214P35658 2090 aaPredicted RBP2.67□□□□□ -1.98
SFSWAP-211ENST00000542813 USP9YO00507 2555 aaPredicted RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 SETD2Q9BYW2 2564 aaPredicted RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PTPRDP23468 1912 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 A0A087WWC5 75 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PGPA6NDG6 321 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 FAM183AA6NL82 134 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 E7EQ34 232 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 F5H5P2 479 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 J3QRE1 110 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PIRO00625 290 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 SOCS1O15524 211 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 NDUFB6O95139 128 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 UBL3O95164 117 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 MT-CO2P00403 227 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 ISG15P05161 165 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 CD14P08571 375 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 CD99P14209 185 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PRTN3P24158 256 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 RPS10P46783 165 aaKnown RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 CXCL12P48061 93 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 SULT1A1P50225 295 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PRDX4Q13162 271 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 EBPQ15125 230 aaKnown RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 CLLU1OSQ5K130 101 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 OR2T2Q6IF00 324 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 NOXRED1Q6NXP6 359 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 FBXL22Q6P050 247 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 ZNF322Q6U7Q0 402 aaPredicted RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 ZNF705AQ6ZN79 300 aaPredicted RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 SLC25A26Q70HW3 274 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 C20orf196Q8IYI0 205 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 SRSF12Q8WXF0 261 aaKnown RBP2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 RAB8BQ92930 207 aa2.66□□□□□ -1.98
SFSWAP-211ENST00000542813 PPCDCQ96CD2 204 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms