RNA–Protein interactions for RNA: ENST00000542238.5

RTN3-211, Transcript of reticulon 3, humanhuman

TSL 3

Gene RTN3, Length 735 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-211ENST00000542238 PRSS29PA6NIE9 313 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 CLN5O75503 358 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 AMBPP02760 352 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 NPY1RP25929 384 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 OPRK1P41145 380 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 AKR1C2P52895 323 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 NUTF2P61970 127 aaKnown RBP11.14□□□□□ -0.63
RTN3-211ENST00000542238 CD300CQ08708 224 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 IZUMO4Q1ZYL8 232 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 AKAP14Q86UN6 197 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 GPX8Q8TED1 209 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 NDUFAF3Q9BU61 184 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 C1QTNF4Q9BXJ3 329 aa11.14□□□□□ -0.63
RTN3-211ENST00000542238 TRAV30A0A087WSZ9 112 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 HELTA6NFD8 242 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 RNASE2P10153 161 aaKnown RBP11.13□□□□□ -0.63
RTN3-211ENST00000542238 PGAM2P15259 253 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 HOXA1P49639 335 aaPredicted RBP11.13□□□□□ -0.63
RTN3-211ENST00000542238 DHRS2Q13268 280 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 C12orf74Q32Q52 190 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 CSNK1G2-AS1Q8NCQ2 148 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 OR4X1Q8NH49 305 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 DCANP1Q8TF63 244 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 C15orf40Q8WUR7 153 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 RAB40CQ96S21 281 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 SCPEP1Q9HB40 452 aa11.13□□□□□ -0.63
RTN3-211ENST00000542238 A0A0B4J293 547 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 IGKV1-5P01602 117 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 RCVRNP35243 200 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 AP2S1P53680 142 aaPredicted RBP11.12□□□□□ -0.63
RTN3-211ENST00000542238 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 SPANXN2Q5MJ10 180 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 ZNF767PQ75MW2 155 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 ZNF486Q96H40 463 aaPredicted RBP11.12□□□□□ -0.63
RTN3-211ENST00000542238 CELA1Q9UNI1 258 aa11.12□□□□□ -0.63
RTN3-211ENST00000542238 M0R2N4 97 aa11.11□□□□□ -0.63
RTN3-211ENST00000542238 RND3P61587 244 aa11.11□□□□□ -0.63
RTN3-211ENST00000542238 SNRPD3P62318 126 aaKnown RBP11.11□□□□□ -0.63
RTN3-211ENST00000542238 TIGITQ495A1 244 aa11.11□□□□□ -0.63
RTN3-211ENST00000542238 FNDC4Q9H6D8 234 aaPredicted RBP11.11□□□□□ -0.63
RTN3-211ENST00000542238 MRPL36Q9P0J6 103 aaKnown RBP11.11□□□□□ -0.63
RTN3-211ENST00000542238 COMMD3Q9UBI1 195 aa11.11□□□□□ -0.63
RTN3-211ENST00000542238 RPS10-NUDT3A0A1W2PQS6 291 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 IGKV1-17P01599 117 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 P0C879 139 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 PIGPP57054 158 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 MLANAQ16655 118 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 NDUFA5Q16718 116 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 Q8WTZ3 238 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 RRNAD1Q96FB5 475 aaKnown RBP11.1□□□□□ -0.63
RTN3-211ENST00000542238 TP53RKQ96S44 253 aa11.1□□□□□ -0.63
RTN3-211ENST00000542238 SDHCQ99643 169 aaPredicted RBP11.1□□□□□ -0.63
RTN3-211ENST00000542238 C3orf85A0A1B0GTC6 90 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 M0QYG6 137 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 RTL8CO15255 209 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 IFNA10P01566 189 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 IFNA21P01568 189 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 ELK1P19419 428 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 LGALS9BQ3B8N2 356 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 C16orf54Q6UWD8 224 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 RNASE11Q8TAA1 199 aaKnown RBP11.09□□□□□ -0.63
RTN3-211ENST00000542238 MIXL1Q9H2W2 232 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 XCL2Q9UBD3 114 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 U3KQE9 123 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 RYR1P21817 5038 aa11.09□□□□□ -0.63
RTN3-211ENST00000542238 RGS13O14921 159 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 HPGDSO60760 199 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 PI3P19957 117 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 HTR2BP41595 481 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 MRPS10P82664 201 aaKnown RBP11.08□□□□□ -0.64
RTN3-211ENST00000542238 UBE2DNLQ8IWF7 75 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 OR1S2Q8NGQ3 325 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 GLMPQ8WWB7 406 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 SEPSECSQ9HD40 501 aaKnown RBP11.08□□□□□ -0.64
RTN3-211ENST00000542238 COPZ2Q9P299 210 aa11.08□□□□□ -0.64
RTN3-211ENST00000542238 TMEM189A5PLL7 270 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 FAM90A26D6RGX4 464 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 CTDSP2O14595 271 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 CTDSPLO15194 276 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 SPART-AS1P0CW21 52 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 SLC25A4P12235 298 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 TNFSF8P32971 234 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 SPCS3P61009 180 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 YPEL3P61236 119 aaPredicted RBP11.07□□□□□ -0.64
RTN3-211ENST00000542238 BSXQ3C1V8 233 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 RNASE10Q5GAN6 216 aaKnown RBP11.07□□□□□ -0.64
RTN3-211ENST00000542238 CCDC71LQ8N9Z2 235 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 SOSTQ9BQB4 213 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 NRN1Q9NPD7 142 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 V9GYH0 126 aa11.07□□□□□ -0.64
RTN3-211ENST00000542238 H3BMM0 161 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 RGS5O15539 181 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 IGLC1P0CG04 106 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 S100A1P23297 94 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 OR10J1P30954 320 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 RND2P52198 227 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 DHODHQ02127 395 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 SSBP1Q04837 148 aaKnown RBP11.06□□□□□ -0.64
RTN3-211ENST00000542238 SP6Q3SY56 376 aa11.06□□□□□ -0.64
RTN3-211ENST00000542238 SOHLH1Q5JUK2 328 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms