RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 PGPA6NDG6 321 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 C8orf88P0DMB2 117 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 KIR2DS2P43631 304 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 TFPI2P48307 235 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 TCF24Q7RTU0 167 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.66
PTPN1-202ENST00000541713 USP9YO00507 2555 aaPredicted RBP10.95□□□□□ -0.66
PTPN1-202ENST00000541713 A8MWP6 167 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 PRR20EP86478 221 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 PRR20CP86479 221 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 PRR20DP86480 221 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 PRR20BP86481 221 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 PRR20AP86496 221 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 CD69Q07108 199 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 SIGLECL1Q8N7X8 197 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 TP53TG3Q9ULZ0 132 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 ARF6P62330 175 aa10.95□□□□□ -0.66
PTPN1-202ENST00000541713 SH2D7A6NKC9 451 aaPredicted RBP10.94□□□□□ -0.66
PTPN1-202ENST00000541713 USF1P22415 310 aaPredicted RBP10.94□□□□□ -0.66
PTPN1-202ENST00000541713 CASP6P55212 293 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 PNKDQ8N490 385 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 OR52E5Q8NH55 327 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 CSN3P07498 182 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 PRSS33Q8NF86 280 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 TP73-AS1Q9UF72 201 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 A0A1W2PPI3 338 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 TAS2R45P59539 299 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 UBE2G1P62253 170 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 ADTRPQ96IZ2 230 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 DIRC2Q96SL1 478 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 SFXN3Q9BWM7 321 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 V9GYV3 84 aa10.94□□□□□ -0.66
PTPN1-202ENST00000541713 DSCAML1Q8TD84 2053 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 TMSB15BA0A087X1C1 80 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 E7EQL1 145 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 RNASEKQ6P5S7 137 aaKnown RBP10.93□□□□□ -0.66
PTPN1-202ENST00000541713 ERASQ7Z444 233 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 ZNF331Q9NQX6 463 aaPredicted RBP10.93□□□□□ -0.66
PTPN1-202ENST00000541713 TNFRSF19Q9NS68 423 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 INSIG2Q9Y5U4 225 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 LINC00312Q9Y6C7 94 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 TMEM178BH3BS89 294 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 GATCO43716 136 aaKnown RBP10.93□□□□□ -0.66
PTPN1-202ENST00000541713 PATE2Q6UY27 113 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 RAB1CQ92928 201 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 RNASE6Q93091 150 aaKnown RBP10.93□□□□□ -0.66
PTPN1-202ENST00000541713 TBL2Q9Y4P3 447 aaKnown RBP10.93□□□□□ -0.66
PTPN1-202ENST00000541713 SETD2Q9BYW2 2564 aaPredicted RBP10.93□□□□□ -0.66
PTPN1-202ENST00000541713 ZNF138P52744 262 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 LCN2P80188 198 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 FOXL1Q12952 345 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 OR4C13Q8NGP0 309 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 ST6GALNAC6Q969X2 333 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 TMEM167BQ9NRX6 74 aa10.93□□□□□ -0.66
PTPN1-202ENST00000541713 TPPP2P59282 170 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 EXOC3-AS1Q8N2X6 119 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.92□□□□□ -0.66
PTPN1-202ENST00000541713 KLRD1Q13241 179 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 CORO2AQ92828 525 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 SLC25A2Q9BXI2 301 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 SNHG12Q9BXW3 62 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 SELENOKQ9Y6D0 94 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 MYO18BQ8IUG5 2567 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 CRYBG3Q68DQ2 2970 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 DLL1O00548 723 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 CFHR2P36980 270 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 LINC00310P59036 64 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 SLAQ13239 276 aa10.92□□□□□ -0.66
PTPN1-202ENST00000541713 HRNRQ86YZ3 2850 aaPredicted RBP10.91□□□□□ -0.66
PTPN1-202ENST00000541713 GCGP01275 180 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 TCF15Q12870 199 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 PGLYRP4Q96LB8 373 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 SCNM1Q9BWG6 230 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 RAB9BQ9NP90 201 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 FBXL7Q9UJT9 491 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 ACACBO00763 2458 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 TLN2Q9Y4G6 2542 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 TCAPO15273 167 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 LOXP28300 417 aaPredicted RBP10.91□□□□□ -0.66
PTPN1-202ENST00000541713 Q6ZVH6 145 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 NDUFA4L2Q9NRX3 87 aa10.91□□□□□ -0.66
PTPN1-202ENST00000541713 IGHV3OR16-13A0A075B7E8 117 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 IGHV3-74A0A0B4J1X5 117 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 IGHV1-69-2A0A0G2JMI3 117 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 CGB1A6NKQ9 187 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 Q56UQ5 140 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 OR5R1Q8NH85 324 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 PMCHL2Q9BQD1 86 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 VAMP8Q9BV40 100 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 DIRC3C9JPN6 131 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 CEACAM8P31997 349 aaPredicted RBP10.9□□□□□ -0.66
PTPN1-202ENST00000541713 VMA21Q3ZAQ7 101 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 IGFL4Q6B9Z1 124 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 OR5B3Q8NH48 314 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 LPAR2Q9HBW0 351 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 WASHC3Q9Y3C0 194 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 C22orf46C9J442 243 aa10.9□□□□□ -0.66
PTPN1-202ENST00000541713 ZNF25P17030 456 aaPredicted RBP10.9□□□□□ -0.66
PTPN1-202ENST00000541713 TMEM11P17152 192 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms