RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, human

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-218	ENST00000541615	ARHGAP5-AS1	Q96IT6	56 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	SPATA33	Q96N06	139 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	CHAC1	Q9BUX1	264 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	LIME1	Q9H400	295 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	GLIPR2	Q9H4G4	154 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	PDF	Q9HBH1	243 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	C20orf141	Q9NUB4	165 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	TCF19	Q9Y242	345 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	TMEM131	Q92545	1883 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	DENND4C	Q5VZ89	1909 aa		4.23	□□□□□ -1.73
SNHG1-218	ENST00000541615	DOCK6	Q96HP0	2047 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	SCN2A	Q99250	2005 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	TRAV13-1	A0A0B4J241	112 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	KRTAP4-8	A0A0G2JLE6	195 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	MYMX	A0A1B0GTQ4	84 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	NPIPB6	E9PJ23	425 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	PLPP1	O14494	284 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	PIRT	P0C851	137 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	EDN2	P20800	178 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	HBB	P68871	147 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	MRPS36	P82909	103 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	C4orf26	Q17RF5	130 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	SP6	Q3SY56	376 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	CT83	Q5H943	113 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	PRR31	Q5SQ13	230 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	TMEM170B	Q5T4T1	132 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	MRPL2	Q5T653	305 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	HRCT1	Q6UXD1	115 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	TMEM14EP	Q6UXP3	125 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	FAM214B	Q7L5A3	538 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	RPS19BP1	Q86WX3	136 aa	Known RBP	4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	C1orf158	Q8N1D5	194 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	ABHD12	Q8N2K0	398 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	FAM57A	Q8TBR7	257 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	NPIPB3	Q92617	1050 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	CARD19	Q96LW7	228 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	LINC00477	Q96M19	166 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	ZNF747	Q9BV97	191 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	SPRY4	Q9C004	299 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	GFRA4	Q9GZZ7	299 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	VSIR	Q9H7M9	311 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	TMEM167B	Q9NRX6	74 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	CACNG5	Q9UF02	275 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	KLF13	Q9Y2Y9	288 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	UBR3	Q6ZT12	1888 aa		4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	NUP214	P35658	2090 aa	Predicted RBP	4.22	□□□□□ -1.73
SNHG1-218	ENST00000541615	NUP98	P52948	1817 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	LINC01553	A4QN01	128 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615		M0QZQ0	153 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	C1orf105	O95561	183 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	PYY	P10082	97 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	GCHFR	P30047	84 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	SSR2	P43308	183 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	TNFRSF4	P43489	277 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	ZNF157	P51786	506 aa	Predicted RBP	4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	FXYD2	P54710	66 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	MFAP2	P55001	183 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	FHL1	Q13642	323 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	FHL3	Q13643	280 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	VGLL4	Q14135	290 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	EBI3	Q14213	229 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	VWC2	Q2TAL6	325 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	SLC25A48	Q6ZT89	311 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	ODF3L1	Q8IXM7	274 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	OR52N5	Q8NH56	324 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	CYB5D2	Q8WUJ1	264 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	KLK6	Q92876	244 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	BMF	Q96LC9	184 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	ZNF488	Q96MN9	340 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	AGPAT4-IT1	Q9H0P7	198 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	RNASE7	Q9H1E1	156 aa	Known RBP	4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	SLC25A22	Q9H936	323 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	PILRA	Q9UKJ1	303 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	SIT1	Q9Y3P8	196 aa		4.21	□□□□□ -1.74
SNHG1-218	ENST00000541615	CEP350	Q5VT06	3117 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	KMT2E	Q8IZD2	1858 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	COL4A4	P53420	1690 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	TRAV8-1	A0A0A6YYK1	113 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615		A0A1B0GWA3	101 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	C15orf62	A8K5M9	175 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	OOSP1	A8MZH6	123 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	PRR32	B1ATL7	298 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615		H7C1H1	209 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615		J3QQQ9	107 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	ZIC3	O60481	467 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	FCGR3B	O75015	233 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	GHRH	P01286	108 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	IGLV1-40	P01703	118 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	IGKC	P01834	107 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	BGLAP	P02818	100 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615		P04436	131 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	CD7	P09564	240 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615		P0DMU3	169 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	FAM231A	P0DMU4	169 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	FAM231C	P0DMU5	169 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	WT1	P19544	449 aa	Predicted RBP	4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	LMO2	P25791	158 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	PFN2	P35080	140 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	PSMB2	P49721	201 aa		4.2	□□□□□ -1.74
SNHG1-218	ENST00000541615	FOXA3	P55318	350 aa	Predicted RBP	4.2	□□□□□ -1.74

Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms