RNA–Protein interactions for RNA: ENST00000541286.5

SFSWAP-210, Transcript of splicing factor SWAP, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-210ENST00000541286 NAA38Q9BRA0 125 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 SHISA9B4DS77 424 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 MORN2Q502X0 79 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 KIR3DL3Q8N743 410 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 ORAOV1Q8WV07 137 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 TCF19Q9Y242 345 aa11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 SONP18583 2426 aaKnown RBP11.68□□□□□ -0.54
SFSWAP-210ENST00000541286 IGKV1D-17A0A075B6S4 117 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 ITGB1BP1O14713 200 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 P0C879 139 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 AMMECR1LQ6DCA0 310 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 IGHV3-48P01763 117 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 YPEL3P61236 119 aaPredicted RBP11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 TMEM108Q6UXF1 575 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 HES4Q9HCC6 221 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 PLXNB1O43157 2135 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 PDE6DO43924 150 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 OR10J4P0C629 311 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 PLA2G2AP14555 144 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 PMCHL2Q9BQD1 86 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 CLEC5AQ9NY25 188 aa11.67□□□□□ -0.54
SFSWAP-210ENST00000541286 BAHCC1Q9P281 2608 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 A0A1W2PN81 502 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 SELENOVP59797 346 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 ADIPOQQ15848 244 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 GGTLC1Q9BX51 225 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 ARL2-SNX15V9GYD0 113 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 TEX15Q9BXT5 2789 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 OR7C2O60412 319 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 CA2P00918 260 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 ADH4P08319 380 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 PRB4P10163 310 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 MLANAQ16655 118 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 MYO9AB2RTY4 2548 aa11.66□□□□□ -0.54
SFSWAP-210ENST00000541286 C15orf65H3BRN8 121 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 SAP30O75446 220 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 IGLL1P15814 213 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 IGFBP2P18065 325 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 TNFSF4P23510 183 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 STUMQ69YW2 141 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 PQLC2Q6ZP29 291 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 ZNF439Q8NDP4 499 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 ITLN1Q8WWA0 313 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 CST9LQ9H4G1 147 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 SLC35D1Q9NTN3 355 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 EIF4EBP1Q13541 118 aaPredicted RBP11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 PSG5Q15238 335 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 NIT1Q86X76 327 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 SLC24A4Q8NFF2 622 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 SGK494Q96LW2 274 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 IL36BQ9NZH7 164 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 NUDT3O95989 172 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 NPY1RP25929 384 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 RPEL1Q2QD12 228 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 RNASEKQ6P5S7 137 aaKnown RBP11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 PPP1R35Q8TAP8 253 aa11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 TECRQ9NZ01 308 aaKnown RBP11.65□□□□□ -0.54
SFSWAP-210ENST00000541286 PRRC2AP48634 2157 aaKnown RBP11.65□□□□□ -0.55
SFSWAP-210ENST00000541286 CRYBB3P26998 211 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 CAMPP49913 170 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 TNXAQ16473 311 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 GCSAMQ8N6F7 178 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 NUDT10Q8NFP7 164 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 TSKUQ8WUA8 353 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 KCNIP2Q9NS61 270 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 CALYQ9NYX4 217 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 hDV102S1A0JD36 115 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 CXorf1O96002 111 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 REG1BP48304 166 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 KRTAP10-9P60411 292 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 RPL19P84098 196 aaKnown RBP11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 MIR17HGQ75NE6 70 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 TCTEX1D1Q8N7M0 179 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 Q8N7P7 452 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 PLEKHA3Q9HB20 300 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 ZNF324O75467 553 aaPredicted RBP11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 GCHFRP30047 84 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 LGALS4P56470 323 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 OCIAD2Q56VL3 154 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 TEPPQ6URK8 271 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 SPATA12Q7Z6I5 190 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 CCL13Q99616 98 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 UBTD1Q9HAC8 227 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 NPVFQ9HCQ7 196 aa11.64□□□□□ -0.55
SFSWAP-210ENST00000541286 ITPR3Q14573 2671 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 J3QW42 95 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 MGST3O14880 152 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 RAB31Q13636 194 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 EFNB3Q15768 340 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 FAM168AQ92567 244 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 LINC00479Q96M42 142 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 SAA2-SAA4A0A096LPE2 208 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 SAA2P0DJI9 122 aaPredicted RBP11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 Q5PR19 223 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 IFI27L2Q9H2X8 130 aa11.63□□□□□ -0.55
SFSWAP-210ENST00000541286 IGHV2-70DA0A0C4DH43 119 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 MUC21A0A0G2JKD1 596 aa11.62□□□□□ -0.55
SFSWAP-210ENST00000541286 MUC21A0A140T8X8 626 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms