RNA–Protein interactions for RNA: ENST00000540798.5

RTN3-210, Transcript of reticulon 3, humanhuman

TSL 1 (best) BASIC

Gene RTN3, Length 3,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-210ENST00000540798 SSBP3Q9BWW4 388 aaPredicted RBP11.02□□□□□ -0.65
RTN3-210ENST00000540798 GGCTO75223 188 aaKnown RBP11.02□□□□□ -0.65
RTN3-210ENST00000540798 CFHR4Q92496 578 aa11.02□□□□□ -0.65
RTN3-210ENST00000540798 SLC25A2Q9BXI2 301 aa11.02□□□□□ -0.65
RTN3-210ENST00000540798 SRD5A3Q9H8P0 318 aa11.02□□□□□ -0.65
RTN3-210ENST00000540798 LY96Q9Y6Y9 160 aa11.02□□□□□ -0.65
RTN3-210ENST00000540798 C9JCJ5 164 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 C8orf88P0DMB2 117 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 TAS2R45P59539 299 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 TNXAQ16473 311 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 C1orf122Q6ZSJ8 110 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 OR1P1Q8NH06 330 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 NPIPB3Q92617 1050 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 IMMP2LQ96T52 175 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 ELOVL1Q9BW60 279 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 LOC105371242A0A075B767 164 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 REG1AP05451 166 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 PRTN3P24158 256 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 SELENOTP62341 195 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 KIR3DL3Q8N743 410 aa11.01□□□□□ -0.65
RTN3-210ENST00000540798 RUSC1-AS1Q66K80 236 aa11□□□□□ -0.65
RTN3-210ENST00000540798 OR5B12Q96R08 314 aa11□□□□□ -0.65
RTN3-210ENST00000540798 SRSF8Q9BRL6 282 aaKnown RBP11□□□□□ -0.65
RTN3-210ENST00000540798 DNAJC4Q9NNZ3 241 aa11□□□□□ -0.65
RTN3-210ENST00000540798 ABCA4P78363 2273 aa11□□□□□ -0.65
RTN3-210ENST00000540798 PPP1R2P9O14990 202 aa11□□□□□ -0.65
RTN3-210ENST00000540798 TYMSP04818 313 aa11□□□□□ -0.65
RTN3-210ENST00000540798 HTR1DP28221 377 aa11□□□□□ -0.65
RTN3-210ENST00000540798 RBX1P62877 108 aa11□□□□□ -0.65
RTN3-210ENST00000540798 MORN5Q5VZ52 161 aa11□□□□□ -0.65
RTN3-210ENST00000540798 PATE2Q6UY27 113 aa11□□□□□ -0.65
RTN3-210ENST00000540798 HIST3H2BBQ8N257 126 aa11□□□□□ -0.65
RTN3-210ENST00000540798 TMEM116Q8NCL8 245 aa11□□□□□ -0.65
RTN3-210ENST00000540798 UHRF2Q96PU4 802 aa11□□□□□ -0.65
RTN3-210ENST00000540798 DPM3Q9P2X0 92 aa11□□□□□ -0.65
RTN3-210ENST00000540798 ARF6P62330 175 aa11□□□□□ -0.65
RTN3-210ENST00000540798 ZNF90Q03938 601 aa11□□□□□ -0.65
RTN3-210ENST00000540798 OR1L4Q8NGR5 311 aa11□□□□□ -0.65
RTN3-210ENST00000540798 FRZBQ92765 325 aa11□□□□□ -0.65
RTN3-210ENST00000540798 F11RQ9Y624 299 aaKnown RBP11□□□□□ -0.65
RTN3-210ENST00000540798 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 CORTO00230 105 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 TIMM23O14925 209 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 PACRGQ96M98 296 aaPredicted RBP10.99□□□□□ -0.65
RTN3-210ENST00000540798 TRGV9Q99603 122 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 FBXL15Q9H469 300 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 HIVEP3Q5T1R4 2406 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 PGPEP1LA6NFU8 196 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 HNF1AP20823 631 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 RNF151Q2KHN1 245 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 NECAP1Q8NC96 275 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 NPBQ8NG41 125 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 OCC1Q8TAD7 63 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 SFRP2Q96HF1 295 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 PLXNB1O43157 2135 aa10.99□□□□□ -0.65
RTN3-210ENST00000540798 NDUFA3O95167 84 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 TRGC1P0CF51 173 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 UQCRFS1P47985 274 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 GGTLC3B5MD39 225 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 K7EN84 100 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 FCN1O00602 326 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 OR7C2O60412 319 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 PAX1P15863 534 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 LCN2P80188 198 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 FOXL1Q12952 345 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 C10orf113Q5VZT2 155 aa10.98□□□□□ -0.65
RTN3-210ENST00000540798 SRSF12Q8WXF0 261 aaKnown RBP10.98□□□□□ -0.65
RTN3-210ENST00000540798 COX7A2P2O60397 106 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 CEACAM3P40198 252 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 KLRD1Q13241 179 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 BATFQ16520 125 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 TEX38Q6PEX7 206 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 C19orf35Q6ZS72 473 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 OR2T10Q8NGZ9 312 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 ZFYVE26Q68DK2 2539 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 PKD1L2Q7Z442 2459 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 TRAV5A0A0B4J249 113 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 IGHV3-48P01763 117 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 GPR6P46095 362 aaPredicted RBP10.97□□□□□ -0.65
RTN3-210ENST00000540798 FAM3BP58499 235 aaPredicted RBP10.97□□□□□ -0.65
RTN3-210ENST00000540798 OR4X1Q8NH49 305 aa10.97□□□□□ -0.65
RTN3-210ENST00000540798 AURKAIP1Q9NWT8 199 aaPredicted RBP10.97□□□□□ -0.65
RTN3-210ENST00000540798 ELOA3CA0A087WX78 387 aaPredicted RBP10.96□□□□□ -0.65
RTN3-210ENST00000540798 C19orf84I3L1E1 186 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 GNLYP22749 145 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 ZFP36P26651 326 aaKnown RBP10.96□□□□□ -0.65
RTN3-210ENST00000540798 CDKN1AP38936 164 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 KCNIP4Q6PIL6 250 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 LHFPL4Q7Z7J7 247 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 EAF1Q96JC9 268 aaPredicted RBP10.96□□□□□ -0.65
RTN3-210ENST00000540798 TNFRSF19Q9NS68 423 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 ZNF355PQ9NSJ1 428 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 TACC2O95359 2948 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 ARHGAP32A7KAX9 2087 aa10.96□□□□□ -0.65
RTN3-210ENST00000540798 PLP1P60201 277 aa10.96□□□□□ -0.66
RTN3-210ENST00000540798 OR5T1Q8NG75 326 aa10.96□□□□□ -0.66
RTN3-210ENST00000540798 OR5AU1Q8NGC0 362 aa10.96□□□□□ -0.66
RTN3-210ENST00000540798 I3L2K1 104 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 NBR2O15453 112 aa10.95□□□□□ -0.66
RTN3-210ENST00000540798 OR10J4P0C629 311 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms