RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 THAP8Q8NA92 274 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 TMEM68Q96MH6 324 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 RBM14Q96PK6 669 aaKnown RBP7.54□□□□□ -1.2
PAAF1-209ENST00000540659 MEGF9Q9H1U4 602 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 MOB4Q9Y3A3 225 aa7.54□□□□□ -1.2
PAAF1-209ENST00000540659 NSD1Q96L73 2696 aaPredicted RBP7.54□□□□□ -1.2
PAAF1-209ENST00000540659 ZFHX3Q15911 3703 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 NPIPB5A8MRT5 1133 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 SEC14L6B5MCN3 397 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 I3L2K1 104 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 SMAD7O15105 426 aaKnown RBP7.53□□□□□ -1.2
PAAF1-209ENST00000540659 ATP6V0E1O15342 81 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 IGHV3-23P01764 117 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 ARL14EPLP0DKL9 152 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 BCL2P10415 239 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 EGR2P11161 476 aaPredicted RBP7.53□□□□□ -1.2
PAAF1-209ENST00000540659 UBE2G2P60604 165 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 KHDC3LQ587J8 217 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 C10orf91Q5T1B1 145 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 UNQ5815/PRO19632Q6UWF5 114 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 SLC35E3Q7Z769 313 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 BCL6BQ8N143 479 aaPredicted RBP7.53□□□□□ -1.2
PAAF1-209ENST00000540659 TTC9CQ8N5M4 171 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 C5orf56Q8N8D9 126 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 OR5R1Q8NH85 324 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 PIFOQ8TCI5 191 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 NKX6-2Q9C056 277 aaPredicted RBP7.53□□□□□ -1.2
PAAF1-209ENST00000540659 SLC35B3Q9H1N7 401 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 SEPSECSQ9HD40 501 aaKnown RBP7.53□□□□□ -1.2
PAAF1-209ENST00000540659 TNFRSF19Q9NS68 423 aa7.53□□□□□ -1.2
PAAF1-209ENST00000540659 CARHSP1Q9Y2V2 147 aaKnown RBP7.53□□□□□ -1.2
PAAF1-209ENST00000540659 LINC01548A6NM66 108 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 COX7A2P2O60397 106 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 PAGE4O60829 102 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 OR2J3O76001 311 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 CXorf1O96002 111 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 CRYGCP07315 174 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 STAG3L2P0CL84 134 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 STAG3L3P0CL85 134 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 NPBWR1P48145 328 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 PSMB3P49720 205 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 KIAA0141Q14154 515 aaPredicted RBP7.52□□□□□ -1.21
PAAF1-209ENST00000540659 TIGITQ495A1 244 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 RBMS3Q6XE24 437 aaKnown RBP7.52□□□□□ -1.21
PAAF1-209ENST00000540659 SVBPQ8N300 66 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 CYB561D1Q8N8Q1 229 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 OR4X1Q8NH49 305 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 SMR3AQ99954 134 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 C20orf24Q9BUV8 137 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 MANBALQ9NQG1 85 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 ZNF355PQ9NSJ1 428 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 THYN1Q9P016 225 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 VAX2Q9UIW0 290 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 FUT9Q9Y231 359 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 ABCA1O95477 2261 aa7.52□□□□□ -1.21
PAAF1-209ENST00000540659 IGLV11-55A0A075B6I3 123 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 TRAV5A0A0B4J249 113 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 A6NDX4 124 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 G3V318 75 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 K7EIM0 57 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 NDUFB8O95169 186 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 HSPB1P04792 205 aaKnown RBP7.51□□□□□ -1.21
PAAF1-209ENST00000540659 OR5G3P0C626 314 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 FOSL1P15407 271 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 ORM2P19652 201 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 BTN1A1Q13410 526 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 DEFB112Q30KQ8 113 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 Q56UQ5 140 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 C10orf113Q5VZT2 155 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 OR1L4Q8NGR5 311 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 OR1B1Q8NGR6 318 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 OR4F5Q8NH21 305 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 SGMS2Q8NHU3 365 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 TMEM37Q8WXS4 190 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 OR4F4Q96R69 305 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 TRGV9Q99603 122 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 SMDT1Q9H4I9 107 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 LINC00527Q9UJ94 153 aa7.51□□□□□ -1.21
PAAF1-209ENST00000540659 PUS1Q9Y606 427 aaKnown RBP eCLIP7.51□□□□□ -1.21
PAAF1-209ENST00000540659 SETD2Q9BYW2 2564 aaPredicted RBP7.5□□□□□ -1.21
PAAF1-209ENST00000540659 M0R036 132 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 OR7C2O60412 319 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 CLN5O75503 358 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 SNAPINO95295 136 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 GCHFRP30047 84 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 S100A7P31151 101 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 ATP5G3P48201 142 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 LYZP61626 148 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 SELENOTP62341 195 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 SOHLH1Q5JUK2 328 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 MORN5Q5VZ52 161 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 CST9LP1Q5W188 147 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 PATE2Q6UY27 113 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 C9orf139Q6ZV77 190 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 IL17RELQ6ZVW7 336 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 S100A7AQ86SG5 101 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 TMEM116Q8NCL8 245 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 CLRN3Q8NCR9 226 aa7.5□□□□□ -1.21
PAAF1-209ENST00000540659 FAM110DQ8TAY7 271 aaPredicted RBP7.5□□□□□ -1.21
PAAF1-209ENST00000540659 FANCD2OSQ96PS1 177 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms