RNA–Protein interactions for RNA: ENST00000540445.5

LMO3-222, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-222ENST00000540445 TP53TG1Q9Y2A0 90 aa6.67□□□□□ -1.34
LMO3-222ENST00000540445 TMEM56-RWDD3S4R434 201 aa6.67□□□□□ -1.34
LMO3-222ENST00000540445 KMT2AQ03164 3969 aa6.67□□□□□ -1.34
LMO3-222ENST00000540445 CXorf65A6NEN9 183 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 MPTX1A8MV57 137 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 JTBO76095 146 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 IFNA10P01566 189 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 SLC25A4P12235 298 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 AP3S2P59780 193 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 TMEM187Q14656 261 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 C2orf83Q53S99 150 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 LYZL2Q7Z4W2 148 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 TMED4Q7Z7H5 227 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 LYG2Q86SG7 212 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 LGI3Q8N145 548 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 TOMM5Q8N4H5 51 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 SLC24A4Q8NFF2 622 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 STXBP6Q8NFX7 210 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 RNASEH2CQ8TDP1 164 aaKnown RBP6.66□□□□□ -1.34
LMO3-222ENST00000540445 RNF183Q96D59 192 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 GRAMD2BQ96HH9 432 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 SOSTQ9BQB4 213 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 VSIRQ9H7M9 311 aa6.66□□□□□ -1.34
LMO3-222ENST00000540445 A0A0B4J2A0 478 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 NPY1RP25929 384 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 OR10J1P30954 320 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 CCR6P51684 374 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 RND2P52198 227 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 DEFB131AP59861 70 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 PMS2P11Q13670 270 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 SMCO1Q147U7 214 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 BSXQ3C1V8 233 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 AARDQ4LEZ3 155 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 LEMD1Q68G75 181 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 OR1S2Q8NGQ3 325 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 OR1S1Q8NH92 325 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 NPIPB3Q92617 1050 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 IL22RA2Q969J5 263 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 ACY3Q96HD9 319 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 RARRES2Q99969 163 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 SHPKQ9UHJ6 478 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 U3KQ87 197 aa6.65□□□□□ -1.34
LMO3-222ENST00000540445 FRAS1Q86XX4 4008 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 PIGBOS1A0A0B4J2F0 54 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 IGKV1-17P01599 117 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 IFNA4P05014 189 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 VAMP1P23763 118 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 CRYBB3P26998 211 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 P2RY1P47900 373 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 EIF2B2P49770 351 aaKnown RBP6.64□□□□□ -1.35
LMO3-222ENST00000540445 AP2S1P53680 142 aaPredicted RBP6.64□□□□□ -1.35
LMO3-222ENST00000540445 SUPT4H1P63272 117 aaKnown RBP6.64□□□□□ -1.35
LMO3-222ENST00000540445 SRPXP78539 464 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 TNFRSF9Q07011 255 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 RBMS2Q15434 407 aaKnown RBP6.64□□□□□ -1.35
LMO3-222ENST00000540445 NMSQ5H8A3 153 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 PRSS54Q6PEW0 395 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 STHQ8IWL8 128 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 TMEM217Q8N7C4 229 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 DTD1Q8TEA8 209 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 RBKSQ9H477 322 aa6.64□□□□□ -1.35
LMO3-222ENST00000540445 TRAV2A0A0B4J234 112 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 CA1P00915 261 aaPredicted RBP6.63□□□□□ -1.35
LMO3-222ENST00000540445 IL4P05112 153 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 HNRNPCP07910 306 aaKnown RBP eCLIP6.63□□□□□ -1.35
LMO3-222ENST00000540445 IGLC1P0CG04 106 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 RD3LP0DJH9 198 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 INPP1P49441 399 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 YPEL3P61236 119 aaPredicted RBP6.63□□□□□ -1.35
LMO3-222ENST00000540445 DHRS2Q13268 280 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 KLF9Q13886 244 aaPredicted RBP6.63□□□□□ -1.35
LMO3-222ENST00000540445 TMEM128Q5BJH2 165 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 OR11H2Q8NH07 326 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 HSPB7Q9UBY9 170 aa6.63□□□□□ -1.35
LMO3-222ENST00000540445 PAIP2BQ9ULR5 123 aaKnown RBP6.63□□□□□ -1.35
LMO3-222ENST00000540445 NUPR2A6NF83 97 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 HELTA6NFD8 242 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 K7EQG2 157 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 ZNF688P0C7X2 276 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 RAB11AP62491 216 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 EWSR1Q01844 656 aaKnown RBP eCLIP6.62□□□□□ -1.35
LMO3-222ENST00000540445 SPANXN2Q5MJ10 180 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 FAM24BQ8N5W8 94 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 GATAD1Q8WUU5 269 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 TMEM170AQ8WVE7 144 aa6.62□□□□□ -1.35
LMO3-222ENST00000540445 SLC25A21Q9BQT8 299 aaPredicted RBP6.62□□□□□ -1.35
LMO3-222ENST00000540445 ZFP92A6NM28 416 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 MED6O75586 246 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 LY6G6CO95867 125 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 TOMM40O96008 361 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 PSG1P11464 419 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 GPX4P36969 197 aaPredicted RBP6.61□□□□□ -1.35
LMO3-222ENST00000540445 ATP5IP56385 69 aaPredicted RBP6.61□□□□□ -1.35
LMO3-222ENST00000540445 ZNF79Q15937 498 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 CEMP1Q6PRD7 247 aaPredicted RBP6.61□□□□□ -1.35
LMO3-222ENST00000540445 C16orf54Q6UWD8 224 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 CENPSQ8N2Z9 138 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 OR51G1Q8NGK1 321 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 TRIM63Q969Q1 353 aa6.61□□□□□ -1.35
LMO3-222ENST00000540445 SLC35E1Q96K37 410 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms