RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 CCDC160A6NGH7 325 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 CRYBB3P26998 211 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 DEFB131AP59861 70 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 KLF9Q13886 244 aaPredicted RBP14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 NMSQ5H8A3 153 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 LYZL2Q7Z4W2 148 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 OR1S2Q8NGQ3 325 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 RNASEH2CQ8TDP1 164 aaKnown RBP14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 DNAH1Q9P2D7 4330 aa14.03□□□□□ -0.16
TNFRSF1A-212ENST00000539372 A0A1W2PS18 150 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 MPTX1A8MV57 137 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 IGLC1P0CG04 106 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 NPY1RP25929 384 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 OR10J1P30954 320 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 P2RY1P47900 373 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 STXBP6Q8NFX7 210 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 TRIM63Q969Q1 353 aa14.02□□□□□ -0.17
TNFRSF1A-212ENST00000539372 A0A0B4J2A0 478 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 IFNA10P01566 189 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 SLC25A4P12235 298 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 FAUP35544 74 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 CCR6P51684 374 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 SMCO1Q147U7 214 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 RBMS2Q15434 407 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 TMED4Q7Z7H5 227 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 NPIPB3Q92617 1050 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 ACY3Q96HD9 319 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 NARS2Q96I59 477 aaKnown RBP14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 RBKSQ9H477 322 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 SHPKQ9UHJ6 478 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 V9GYH0 126 aa14.01□□□□□ -0.17
TNFRSF1A-212ENST00000539372 TRAV2A0A0B4J234 112 aa14□□□□□ -0.17
TNFRSF1A-212ENST00000539372 ANXA3P12429 323 aa14□□□□□ -0.17
TNFRSF1A-212ENST00000539372 LGI3Q8N145 548 aa14□□□□□ -0.17
TNFRSF1A-212ENST00000539372 TOMM5Q8N4H5 51 aa14□□□□□ -0.17
TNFRSF1A-212ENST00000539372 HSPB7Q9UBY9 170 aa14□□□□□ -0.17
TNFRSF1A-212ENST00000539372 CACFD1Q9UGQ2 172 aa14□□□□□ -0.17
TNFRSF1A-212ENST00000539372 CA1P00915 261 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 AP3S2P59780 193 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 YPEL3P61236 119 aaPredicted RBP13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 SRPXP78539 464 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 ZNF79Q15937 498 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 ETFRF1Q6IPR1 90 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 NOXA1Q86UR1 476 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 DTD1Q8TEA8 209 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 Q8WTZ3 238 aa13.99□□□□□ -0.17
TNFRSF1A-212ENST00000539372 K7EQG2 157 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 HNRNPCP07910 306 aaKnown RBP eCLIP13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 S100A5P33763 92 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 OR1S1Q8NH92 325 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 GRAMD2BQ96HH9 432 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 RARRES2Q99969 163 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 U3KQ87 197 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 U3KQE9 123 aa13.98□□□□□ -0.17
TNFRSF1A-212ENST00000539372 IL4P05112 153 aa13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 ZNF688P0C7X2 276 aa13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 USF2Q15853 346 aaPredicted RBP13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 STHQ8IWL8 128 aa13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 TMEM217Q8N7C4 229 aa13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 OR11H2Q8NH07 326 aa13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 GATAD1Q8WUU5 269 aa13.97□□□□□ -0.17
TNFRSF1A-212ENST00000539372 NUPR2A6NF83 97 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 IFNA4P05014 189 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 RD3LP0DJH9 198 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 VAMP1P23763 118 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 TMEM128Q5BJH2 165 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 C16orf54Q6UWD8 224 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 DCANP1Q8TF63 244 aa13.96□□□□□ -0.17
TNFRSF1A-212ENST00000539372 ALMS1Q8TCU4 4167 aa13.96□□□□□ -0.18
TNFRSF1A-212ENST00000539372 KNCNA6PVL3 124 aa13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 TOMM40O96008 361 aa13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 ATF4P18848 351 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 DHRS2Q13268 280 aa13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 CEMP1Q6PRD7 247 aaPredicted RBP13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 CCDC190Q86UF4 302 aa13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 GLMPQ8WWB7 406 aa13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 RBM38Q9H0Z9 239 aaKnown RBP13.95□□□□□ -0.18
TNFRSF1A-212ENST00000539372 HELTA6NFD8 242 aa13.94□□□□□ -0.18
TNFRSF1A-212ENST00000539372 IAPPP10997 89 aa13.94□□□□□ -0.18
TNFRSF1A-212ENST00000539372 EIF2B2P49770 351 aaKnown RBP13.94□□□□□ -0.18
TNFRSF1A-212ENST00000539372 DUXBA0A1W2PPF3 345 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 DEFB4AO15263 64 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PITX3O75364 302 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PSG1P11464 419 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PPP1R1AQ13522 171 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 ACTL10Q5JWF8 245 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 TRPT1Q86TN4 253 aaKnown RBP13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 OR51G1Q8NGK1 321 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 LINC00476Q8WZB0 136 aa13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 SLC25A21Q9BQT8 299 aaPredicted RBP13.93□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PIGBOS1A0A0B4J2F0 54 aa13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 LY6G6CO95867 125 aa13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 GIG44P09565 113 aaPredicted RBP13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 GAMTQ14353 236 aa13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PLECQ15149 4684 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PSMG4Q5JS54 123 aa13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 SLC35E1Q96K37 410 aa13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PBDC1Q9BVG4 233 aa13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 PAIP2BQ9ULR5 123 aaKnown RBP13.92□□□□□ -0.18
TNFRSF1A-212ENST00000539372 HYDINQ4G0P3 5121 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms