RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 PRRG2O14669 202 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 AGFG2O95081 481 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 DEPPQ9NTK1 212 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CHTOPQ9Y3Y2 248 aaKnown RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 IGHV3-72A0A0B4J1Y9 119 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 K7ERJ3 54 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 C1QL2Q7Z5L3 287 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 Q9H3A6 140 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 PILRBQ9UKJ0 227 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 K7EQS6 105 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 FCN3O75636 299 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 EBLN2Q6P2I7 272 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 RFNGQ9Y644 331 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 NPFFO15130 113 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CELA2BP08218 269 aaPredicted RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 S100A7L2Q5SY68 101 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 Q6AWC8 147 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CYTL1Q9NRR1 136 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 NBEAP1P0C6P0 100 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 GAGE2AQ6NT46 116 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 COL5A1P20908 1838 aaPredicted RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 C17orf98A8MV24 154 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 C9JAW5 83 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 MLNRO43193 412 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 LGALS1P09382 135 aaKnown RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 RNASE4P34096 147 aaKnown RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 ZNF658BQ4V348 819 aaPredicted RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 CFAP161Q6P656 301 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 NABP1Q96AH0 204 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 KLHDC3Q9BQ90 382 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 MCRIP2Q9BUT9 160 aaKnown RBP4.78□□□□□ -1.64
CSMD1-215ENST00000537824 DLL3Q9NYJ7 618 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 IFI27L2Q9H2X8 130 aa4.78□□□□□ -1.64
CSMD1-215ENST00000537824 DXOO77932 396 aaKnown RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 NCR2O95944 276 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 RPL39P5Q59GN2 51 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 CSTL1Q9H114 145 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 FAM60AQ9NP50 221 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 SLC25A15Q9Y619 301 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 RAI1Q7Z5J4 1906 aaPredicted RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 TRBV20-1A0A075B6N2 111 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 COX14Q96I36 57 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 SAXO1Q8IYX7 474 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 ABHD17AQ96GS6 310 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 SRSF8Q9BRL6 282 aaKnown RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 NXT2Q9NPJ8 142 aaKnown RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 RNF7Q9UBF6 113 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF415Q09FC8 603 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 LAGE3Q14657 143 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF826PQ6ZT77 177 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 RNF186Q9NXI6 227 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 DEFB109BQ30KR1 87 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 FAM27BQ5VT28 67 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 ZNF385AQ96PM9 386 aaKnown RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 CHAC1Q9BUX1 264 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 PROB1E7EW31 1015 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 OR2H2O95918 312 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 CTGFP29279 349 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 LINC01551Q86U37 167 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV2-5P01817 119 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 OR9G9P0C7N8 305 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 PEAR1Q5VY43 1037 aaPredicted RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 RNASE8Q8TDE3 154 aaKnown RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 AGMATQ9BSE5 352 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 SMAD7O15105 426 aaKnown RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 GATA2P23769 480 aaPredicted RBP4.77□□□□□ -1.65
CSMD1-215ENST00000537824 OTORQ9NRC9 128 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 NPC2P61916 151 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 SLC25A47Q6Q0C1 308 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 TMEM52Q8NDY8 209 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 H3BMM0 161 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 ETDBQ3ZM63 59 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 UBE2WQ96B02 151 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 C9JCJ5 164 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 NPIPB11E5RHQ5 1161 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 TDHQ8IZJ6 230 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 ARPC1AQ92747 370 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 LTBP3Q9NS15 1303 aa4.77□□□□□ -1.65
CSMD1-215ENST00000537824 MST1LQ2TV78 715 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 TEX45Q8NA69 505 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3-64A0A075B6Q5 118 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 GCSAMQ8N6F7 178 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 LIFP15018 202 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 PPIFP30405 207 aaKnown RBP4.76□□□□□ -1.65
CSMD1-215ENST00000537824 CCL13Q99616 98 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 VSIRQ9H7M9 311 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 C9orf40Q8IXQ3 194 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 IGHV3-35A0A0C4DH35 117 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 A0A1W2PQD3 144 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 CRYBA2P53672 197 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 GAGE5Q13069 117 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 GAGE6Q13070 117 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 LINC01590Q5TEZ4 76 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 ELSPBP1Q96BH3 223 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 CALYQ9NYX4 217 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 CR1P17927 2039 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A10PA6NDY2 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A18PA6NE21 464 aa4.76□□□□□ -1.65
CSMD1-215ENST00000537824 FAM90A16PA6NEW6 464 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms