RNA–Protein interactions for RNA: ENST00000537490.1

USP28-203, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 567 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-203ENST00000537490 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.13□□□□□ -1.43
USP28-203ENST00000537490 CLEC5AQ9NY25 188 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 X6R8D5 127 aa6.13□□□□□ -1.43
USP28-203ENST00000537490 ELOA3CA0A087WX78 387 aaPredicted RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 RPS10-NUDT3A0A1W2PQS6 291 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 ZNF705EA8MWA4 302 aaPredicted RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 AGRNO00468 2067 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 CTDSP2O14595 271 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 B3GALNT1O75752 331 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 NXPH3O95157 252 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 SMIM18P0DKX4 95 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 SPP1P10451 314 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 HLA-DMBP28068 263 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 HTR2BP41595 481 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 RND2P52198 227 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 TCTAP57738 103 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 YPEL3P61236 119 aaPredicted RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 DHODHQ02127 395 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 DHRS2Q13268 280 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 MEF2DQ14814 521 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 C2orf83Q53S99 150 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 GPR107Q5VW38 600 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 C16orf54Q6UWD8 224 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 FAM219AQ8IW50 185 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 CSNK1G2-AS1Q8NCQ2 148 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 OR1S2Q8NGQ3 325 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 Q8WTZ3 238 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 C15orf40Q8WUR7 153 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 GLMPQ8WWB7 406 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 RBPMSQ93062 196 aaKnown RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 NARS2Q96I59 477 aaKnown RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 RAB40CQ96S21 281 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 HRH4Q9H3N8 390 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 NAA60Q9H7X0 242 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 HEYLQ9NQ87 328 aaPredicted RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 CACNG5Q9UF02 275 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 GPR132Q9UNW8 380 aa6.12□□□□□ -1.43
USP28-203ENST00000537490 C14orf166Q9Y224 244 aaKnown RBP6.12□□□□□ -1.43
USP28-203ENST00000537490 KMT2AQ03164 3969 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 HELTA6NFD8 242 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 CEBPZOSA8MTT3 80 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 C11orf94C9JXX5 98 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 GABARAPH6UMI1 98 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 SCGB2A1O75556 95 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 HNRNPCP07910 306 aaKnown RBP eCLIP6.11□□□□□ -1.43
USP28-203ENST00000537490 MIFP14174 115 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 OR10J1P30954 320 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 USF2Q15853 346 aaPredicted RBP6.11□□□□□ -1.43
USP28-203ENST00000537490 TMEM41BQ5BJD5 291 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 PSMG4Q5JS54 123 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 TMEM268Q5VZI3 342 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 Q6ZTC4 211 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 SLC24A4Q8NFF2 622 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 RNASEH2CQ8TDP1 164 aaKnown RBP6.11□□□□□ -1.43
USP28-203ENST00000537490 NPIPB3Q92617 1050 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 PRR13Q9NZ81 148 aa6.11□□□□□ -1.43
USP28-203ENST00000537490 TRAV10A0A0B4J240 114 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 CRYM-AS1A6NIL9 109 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 DISC1C4P0D8 188 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 RGS5O15539 181 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 BUB3O43684 328 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 IL4P05112 153 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 SLC25A4P12235 298 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 NPY1RP25929 384 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 EIF2B2P49770 351 aaKnown RBP6.1□□□□□ -1.43
USP28-203ENST00000537490 AP2S1P53680 142 aaPredicted RBP6.1□□□□□ -1.43
USP28-203ENST00000537490 SSBP1Q04837 148 aaKnown RBP6.1□□□□□ -1.43
USP28-203ENST00000537490 SPCS2Q15005 226 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 SURF2Q15527 256 aaPredicted RBP6.1□□□□□ -1.43
USP28-203ENST00000537490 ZNF767PQ75MW2 155 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 OR4C16Q8NGL9 310 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 SMIM4Q8WVI0 70 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 TBC1D24Q9ULP9 559 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 CELA1Q9UNI1 258 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 TMEM56-RWDD3S4R434 201 aa6.1□□□□□ -1.43
USP28-203ENST00000537490 DNAH10Q8IVF4 4471 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 IGHV4-4A0A075B6R2 117 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 FAM90A26D6RGX4 464 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 H3BMM0 161 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 TOMM40O96008 361 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 AKAIN1P0CW23 69 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 RD3LP0DJH9 198 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 PSG1P11464 419 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 SMCPP49901 116 aaPredicted RBP6.09□□□□□ -1.43
USP28-203ENST00000537490 MRPS10P82664 201 aaKnown RBP6.09□□□□□ -1.43
USP28-203ENST00000537490 C12orf74Q32Q52 190 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 NMSQ5H8A3 153 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 ETFRF1Q6IPR1 90 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 OR51S1Q8NGJ8 323 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 OR51G1Q8NGK1 321 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 ACY3Q96HD9 319 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 SCRT1Q9BWW7 348 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 XCL2Q9UBD3 114 aa6.09□□□□□ -1.43
USP28-203ENST00000537490 CTDSPLO15194 276 aa6.08□□□□□ -1.44
USP28-203ENST00000537490 IFNA10P01566 189 aa6.08□□□□□ -1.44
USP28-203ENST00000537490 SULT1A3P0DMM9 295 aa6.08□□□□□ -1.44
USP28-203ENST00000537490 SULT1A4P0DMN0 295 aa6.08□□□□□ -1.44
USP28-203ENST00000537490 ALDH3B2P48448 385 aa6.08□□□□□ -1.44
USP28-203ENST00000537490 DEFB1P60022 68 aa6.08□□□□□ -1.44
USP28-203ENST00000537490 IL18Q14116 193 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms