RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 RPL19P84098 196 aaKnown RBP10.86□□□□□ -0.67
SMG6-203ENST00000536871 FOXL1Q12952 345 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 MMDQ15546 238 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 MLANAQ16655 118 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 OR4X1Q8NH49 305 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 TMEM37Q8WXS4 190 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 CFHR4Q92496 578 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 SFRP2Q96HF1 295 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 FBXL15Q9H469 300 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 UBTD1Q9HAC8 227 aa10.86□□□□□ -0.67
SMG6-203ENST00000536871 DMXL2Q8TDJ6 3036 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 PKDREJQ9NTG1 2253 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 FOXH1O75593 365 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 GNLYP22749 145 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 LGALS4P56470 323 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 S100A7AQ86SG5 101 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 FAM122AQ96E09 287 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 ROS1P08922 2347 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 IGKV1D-37A0A075B6S9 117 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 DLEU1O43261 78 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 LY6HO94772 140 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 CNIH1O95406 144 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 GZMBP10144 247 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 UBE2L3P68036 154 aaKnown RBP10.85□□□□□ -0.67
SMG6-203ENST00000536871 EBI3Q14213 229 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 PRO1933Q9H354 126 aa10.85□□□□□ -0.67
SMG6-203ENST00000536871 HELTA6NFD8 242 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 TRGC2P03986 189 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 TRGC1P0CF51 173 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 CNTFRP26992 372 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 HCP5Q6MZN7 132 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 ZNF664Q8N3J9 261 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 ZNF503Q96F45 646 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 FAM167A-AS1Q96KT0 104 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 PAXXQ9BUH6 204 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 GOLT1BQ9Y3E0 138 aa10.84□□□□□ -0.67
SMG6-203ENST00000536871 PHOX2AO14813 284 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 GATA2P23769 480 aaPredicted RBP10.83□□□□□ -0.68
SMG6-203ENST00000536871 VMO1Q7Z5L0 202 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 OR5AU1Q8NGC0 362 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 OR10G8Q8NGN5 311 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 SLC25A2Q9BXI2 301 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 LPAR2Q9HBW0 351 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 ZNF355PQ9NSJ1 428 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 C1RLQ9NZP8 487 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 ATMQ13315 3056 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 MALRD1Q5VYJ5 2156 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 IGHV2-70DA0A0C4DH43 119 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 HYPMO75409 117 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 SCGB2A1O75556 95 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 REG1AP05451 166 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 CDKN1AP38936 164 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 PLA2G5P39877 138 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 GNG4P50150 75 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 C5orf64Q2M2E5 130 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 TIGITQ495A1 244 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 TEX38Q6PEX7 206 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 EAF1Q96JC9 268 aaPredicted RBP10.83□□□□□ -0.68
SMG6-203ENST00000536871 DERL1Q9BUN8 251 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 SIRPDQ9H106 197 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 RNF24Q9Y225 148 aa10.83□□□□□ -0.68
SMG6-203ENST00000536871 IGF2RP11717 2491 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 TRAV30A0A087WSZ9 112 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 A0A1W2PPR1 153 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 OVOL3O00110 214 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 OR10J4P0C629 311 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 UBE2E1P51965 193 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 ERVFC1-1P60608 527 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 ZNF90Q03938 601 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 IQCJQ1A5X6 159 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 ZNF562Q6V9R5 426 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 LINC00305Q7Z4B0 112 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 OCC1Q8TAD7 63 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 POLR3KQ9Y2Y1 108 aaPredicted RBP10.82□□□□□ -0.68
SMG6-203ENST00000536871 HILPDAQ9Y5L2 63 aa10.82□□□□□ -0.68
SMG6-203ENST00000536871 DCHS1Q96JQ0 3298 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 A0A1W2PPQ1 181 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 NPIPB5A8MRT5 1133 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 BRS3P32247 399 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 PDLIM4P50479 330 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 MFAP2P55001 183 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 DLX1P56177 255 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 COTL1Q14019 142 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 FXYD3Q14802 87 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 FRZBQ92765 325 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 SMIM12Q96EX1 92 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 ZNF48Q96MX3 618 aaPredicted RBP10.81□□□□□ -0.68
SMG6-203ENST00000536871 WNT10AQ9GZT5 417 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 LAMA5O15230 3695 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 TRBV20OR9-2A0A075B6H5 130 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 I3L2K1 104 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 EREGO14944 169 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 FAM106CPP0CH98 169 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 HOXB4P17483 251 aaPredicted RBP10.81□□□□□ -0.68
SMG6-203ENST00000536871 CRYBB3P26998 211 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 UQCRFS1P47985 274 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 SUMO1P63165 101 aaKnown RBP10.81□□□□□ -0.68
SMG6-203ENST00000536871 HES1Q14469 280 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 PATE2Q6UY27 113 aa10.81□□□□□ -0.68
SMG6-203ENST00000536871 NECAP1Q8NC96 275 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms