RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 DNAH2Q9P225 4427 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 PKHD1P08F94 4074 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 IGHV3OR16-12A0A075B7B8 117 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FAM25AB3EWG3 89 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FAM25CB3EWG5 89 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FAM25GB3EWG6 89 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ATP6V1G2O95670 118 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 OR10J1P30954 320 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 NUP62P37198 522 aaPredicted RBP9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RND2P52198 227 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 LGALS9BQ3B8N2 356 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 C16orf54Q6UWD8 224 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SIGLEC15Q6ZMC9 328 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ARRDC1Q8N5I2 433 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ZFAND1Q8TCF1 268 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 GLMPQ8WWB7 406 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 MRPL36Q9P0J6 103 aaKnown RBP9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 PFDN2Q9UHV9 154 aa9.33□□□□□ -0.92
TNFRSF1A-207ENST00000535958 IGLV2-18A0A075B6J9 118 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 CEBPZOSA8MTT3 80 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FAM90A26D6RGX4 464 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 B3GALNT1O75752 331 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TNFAIP8O95379 198 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 IGKV1-17P01599 117 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 IGLC1P0CG04 106 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SPCS3P61009 180 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SP6Q3SY56 376 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SCGB2B2Q4G0G5 96 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FAM219AQ8IW50 185 aa9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RNASEH2CQ8TDP1 164 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SEPSECSQ9HD40 501 aaKnown RBP9.32□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RTL8CO15255 209 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 IGKV3-20P01619 116 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 P0C879 139 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 HLA-DRB4P13762 266 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TBPP20226 339 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 YPEL3P61236 119 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 DHODHQ02127 395 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 MLANAQ16655 118 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 NOXA1Q86UR1 476 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SLC24A4Q8NFF2 622 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 COQ8AQ8NI60 647 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ACY3Q96HD9 319 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FAM210BQ96KR6 192 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 CTNNBIP1Q9NSA3 81 aaPredicted RBP9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 C14orf166Q9Y224 244 aaKnown RBP9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RFNGQ9Y644 331 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 HLA-DRB4X5D2U9 266 aa9.31□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 H3BMM0 161 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 HPGDSO60760 199 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 CD3DP04234 171 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RD3LP0DJH9 198 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 HTN3P15516 51 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ELK1P19419 428 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 UCP1P25874 307 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ID1P41134 155 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 USF2Q15853 346 aaPredicted RBP9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 BSXQ3C1V8 233 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 C2orf83Q53S99 150 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 MZT2AQ6P582 158 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 PRSS54Q6PEW0 395 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 OR52E5Q8NH55 327 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 NEU1Q99519 415 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 C7orf50Q9BRJ6 194 aaKnown RBP9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 PBDC1Q9BVG4 233 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 SCRT1Q9BWW7 348 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 U3KQE9 123 aa9.3□□□□□ -0.92
TNFRSF1A-207ENST00000535958 A0A0G2JRQ6 117 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TEX13DA0A0J9YY54 714 aaPredicted RBP9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TOMM40O96008 361 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 FXYD7P58549 80 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 LHFPL1Q86WI0 220 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 OR13C8Q8NGS7 320 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 AP3S1Q92572 193 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 YIPF6Q96EC8 236 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 LINC00052Q96N35 136 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 NIPSNAP3BQ9BS92 247 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 CACNG5Q9UF02 275 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 CACFD1Q9UGQ2 172 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 GOLT1BQ9Y3E0 138 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 DNAH17Q9UFH2 4485 aa9.29□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RYR1P21817 5038 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 DNAH11Q96DT5 4516 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 A0A087WXM4 84 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 BUB3O43684 328 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 HBE1P02100 147 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 OR5AC1P0C628 307 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TAS2R19P59542 299 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 ZNF705AQ6ZN79 300 aaPredicted RBP9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 OR4B1Q8NGF8 309 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TERB2Q8NHR7 220 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 C15orf40Q8WUR7 153 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 NPIPB3Q92617 1050 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 RBPMSQ93062 196 aaKnown RBP9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 PPP1R14BQ96C90 147 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TMEM222Q9H0R3 208 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 KLK11Q9UBX7 282 aa9.28□□□□□ -0.92
TNFRSF1A-207ENST00000535958 TMED3Q9Y3Q3 217 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms