RNA–Protein interactions for RNA: ENST00000535941.5

COL21A1-212, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL21A1, Length 3,369 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-212ENST00000535941 IGKV1-33P01594 117 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 IGHV3-7P01780 117 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 CRYGCP07315 174 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 USF1P22415 310 aaPredicted RBP6.4□□□□□ -1.38
COL21A1-212ENST00000535941 HINT1P49773 126 aaPredicted RBP6.4□□□□□ -1.38
COL21A1-212ENST00000535941 TPPP2P59282 170 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 SUMO1P63165 101 aaKnown RBP6.4□□□□□ -1.38
COL21A1-212ENST00000535941 HBG1P69891 147 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 HBG2P69892 147 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 SLC38A11Q08AI6 406 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 TMEM217Q8N7C4 229 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 OR2T10Q8NGZ9 312 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 BTF3L4Q96K17 158 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 AURKAIP1Q9NWT8 199 aaPredicted RBP6.4□□□□□ -1.38
COL21A1-212ENST00000535941 PCNX1Q96RV3 2341 aa6.4□□□□□ -1.38
COL21A1-212ENST00000535941 CELSR2Q9HCU4 2923 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 LOC105371242A0A075B767 164 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 PSMB11A5LHX3 300 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 RRHO14718 337 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 RNASE2P10153 161 aaKnown RBP6.4□□□□□ -1.39
COL21A1-212ENST00000535941 CD1BP29016 333 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 CDKN1AP38936 164 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 LGALS7P47929 136 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 PAX8Q06710 450 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 FAM90A2PQ658T7 463 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 LCN15Q6UWW0 184 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 PNKDQ8N490 385 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 H1FXQ92522 213 aaKnown RBP6.4□□□□□ -1.39
COL21A1-212ENST00000535941 PINX1Q96BK5 328 aaKnown RBP6.4□□□□□ -1.39
COL21A1-212ENST00000535941 AMMECR1Q9Y4X0 333 aaPredicted RBP6.4□□□□□ -1.39
COL21A1-212ENST00000535941 OR51B2Q9Y5P1 312 aa6.4□□□□□ -1.39
COL21A1-212ENST00000535941 A0A1B0GUS0 222 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 LOC102723971A0A1B0GUV8 181 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 TEX22C9J3V5 150 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 K7ERU9 68 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 MPDU1O75352 247 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 RUNX1Q01196 453 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 PRSS8Q16651 343 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 OCIAD2Q56VL3 154 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 MINOS1Q5TGZ0 78 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 RPUSD4Q96CM3 377 aaKnown RBP6.39□□□□□ -1.39
COL21A1-212ENST00000535941 HSPB9Q9BQS6 159 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 NPCDR1Q9BY65 106 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 TRAPPC1Q9Y5R8 145 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 COX11Q9Y6N1 276 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 MINOS1-NBL1R4GNA1 71 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 MALRD1Q5VYJ5 2156 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 NDUFB8O95169 186 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 PRB1P04280 392 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 IL3RAP26951 378 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 ERVK-16P61578 105 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 ZNF787Q6DD87 383 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 PRR27Q6MZM9 219 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 ACSM6Q6P461 480 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 KCNIP4Q6PIL6 250 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 TREML4Q6UXN2 200 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 LHX4Q969G2 390 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 SMIM12Q96EX1 92 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 UBTD1Q9HAC8 227 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 UQCR10Q9UDW1 63 aa6.39□□□□□ -1.39
COL21A1-212ENST00000535941 TBL2Q9Y4P3 447 aaKnown RBP6.39□□□□□ -1.39
COL21A1-212ENST00000535941 IGLC7A0M8Q6 106 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PFN1P07737 140 aaKnown RBP6.38□□□□□ -1.39
COL21A1-212ENST00000535941 BCL2P10415 239 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 KRTDAPP60985 99 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PRR20EP86478 221 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PRR20CP86479 221 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PRR20DP86480 221 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PRR20BP86481 221 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PRR20AP86496 221 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 OR4B1Q8NGF8 309 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 OR51G1Q8NGK1 321 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 OR4A16Q8NH70 328 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 MEGF9Q9H1U4 602 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 VSIRQ9H7M9 311 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 NAT8Q9UHE5 227 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 TACC2O95359 2948 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 SVEP1Q4LDE5 3571 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 H3BP45 60 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 APOA2P02652 100 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 MYOD1P15172 320 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 OPRK1P41145 380 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 GPR6P46095 362 aaPredicted RBP6.38□□□□□ -1.39
COL21A1-212ENST00000535941 ACTL10Q5JWF8 245 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 TEX43Q6ZNM6 134 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 LINC01551Q86U37 167 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 DYNAPQ8N1N2 210 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 VSTM2AQ8TAG5 236 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 FLYWCH2Q96CP2 140 aaKnown RBP6.38□□□□□ -1.39
COL21A1-212ENST00000535941 MGST2Q99735 147 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 CST9LQ9H4G1 147 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 TENM4Q6N022 2769 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 CRYBG3Q68DQ2 2970 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 A0A0U1RQK1 487 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 ENSAO43768 121 aaKnown RBP6.38□□□□□ -1.39
COL21A1-212ENST00000535941 VENTXO95231 258 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 IFNA1P01562 189 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 PSG5Q15238 335 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 SPATA45Q537H7 98 aa6.38□□□□□ -1.39
COL21A1-212ENST00000535941 SPANXN5Q5MJ07 72 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms