RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 EIF2B2P49770 351 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 LSM3P62310 102 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 LGALS9BQ3B8N2 356 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 C2orf83Q53S99 150 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 LEMD1Q68G75 181 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 C16orf54Q6UWD8 224 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 ZNF705AQ6ZN79 300 aaPredicted RBP8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 CENPSQ8N2Z9 138 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 RNASEH2CQ8TDP1 164 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 GLMPQ8WWB7 406 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 ABHD1Q96SE0 405 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 C1QTNF4Q9BXJ3 329 aa8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 MRPL36Q9P0J6 103 aaKnown RBP8.08□□□□□ -1.12
CLSTN3-206ENST00000535668 IGHV4-4A0A075B6R2 117 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 IGHV3OR16-13A0A075B7E8 117 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 IGHV3-74A0A0B4J1X5 117 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 IGLL5B9A064 214 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 C4BPBP20851 252 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 HTR2BP41595 481 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 HOXA1P49639 335 aaPredicted RBP8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 SPCS3P61009 180 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 SSBP1Q04837 148 aaKnown RBP8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 Q6ZTC4 211 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 POM121L12Q8N7R1 296 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 TERB2Q8NHR7 220 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 ZFAND1Q8TCF1 268 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 C15orf40Q8WUR7 153 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 CHAC2Q8WUX2 184 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 PINX1Q96BK5 328 aaKnown RBP8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 TP53RKQ96S44 253 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 MTFP1Q9UDX5 166 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 TBC1D24Q9ULP9 559 aa8.07□□□□□ -1.12
CLSTN3-206ENST00000535668 IGKV3-7A0A075B6H7 116 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 C3orf85A0A1B0GTC6 90 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 SMIM9A6NGZ8 99 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 ZNF705FA8MVS1 300 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 BUB3O43684 328 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 IGHV3-48P01763 117 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 ZNF705DP0CH99 300 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 ZNF705BP0CI00 300 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 P0DMU3 169 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 FAM231AP0DMU4 169 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 FAM231CP0DMU5 169 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 TGFBR1P36897 503 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 ATP5IP56385 69 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 PIGPP57054 158 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 NUTF2P61970 127 aaKnown RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 SURF2Q15527 256 aaPredicted RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 C12orf74Q32Q52 190 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 PRSS54Q6PEW0 395 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 Q6ZRM9 215 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 SLC35G3Q8N808 338 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 OR1S2Q8NGQ3 325 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 NARS2Q96I59 477 aaKnown RBP8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 RAB40CQ96S21 281 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 TMEM222Q9H0R3 208 aa8.06□□□□□ -1.12
CLSTN3-206ENST00000535668 RPS10-NUDT3A0A1W2PQS6 291 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 TMEM189A5PLL7 270 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 H3BMM0 161 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 DEFB4AO15263 64 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 ELK1P19419 428 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 TNFSF8P32971 234 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 BCAP31P51572 246 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 Q6ZR54 194 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 GLYATL2Q8WU03 294 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 NRN1Q9NPD7 142 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 RABAC1Q9UI14 185 aa8.05□□□□□ -1.12
CLSTN3-206ENST00000535668 A0A0G2JRQ6 117 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 TEX48A0A1B0GUV7 120 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 FABP12A6NFH5 140 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 FAM90A26D6RGX4 464 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 RTL8CO15255 209 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 GSTZ1O43708 216 aaPredicted RBP8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 IFNA17P01571 189 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 HNRNPCP07910 306 aaKnown RBP eCLIP8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 HLA-DRB4P13762 266 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 OPRK1P41145 380 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 NKX2-1P43699 371 aaPredicted RBP8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 SNRPD3P62318 126 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 IZUMO4Q1ZYL8 232 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 RNASE10Q5GAN6 216 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 NMSQ5H8A3 153 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 ETFRF1Q6IPR1 90 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 NOXA1Q86UR1 476 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 CCDC71LQ8N9Z2 235 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 SLC24A4Q8NFF2 622 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 STXBP6Q8NFX7 210 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 Q8WTZ3 238 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 TMEM170AQ8WVE7 144 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 DEDD2Q8WXF8 326 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 RRNAD1Q96FB5 475 aaKnown RBP8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 PDCD10Q9BUL8 212 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 KLK11Q9UBX7 282 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 TMEM56-RWDD3S4R434 201 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 HLA-DRB4X5D2U9 266 aa8.04□□□□□ -1.12
CLSTN3-206ENST00000535668 DEFB131BA0A096LNP1 70 aa8.03□□□□□ -1.12
CLSTN3-206ENST00000535668 A0A1B0GVG6 124 aa8.03□□□□□ -1.12
CLSTN3-206ENST00000535668 A8MTW9 85 aa8.03□□□□□ -1.12
CLSTN3-206ENST00000535668 RGS5O15539 181 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms