RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 C5orf51A6NDU8 294 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 SCAF4O95104 1147 aaKnown RBP16.51■□□□□ 0.23
SSPN-204ENST00000535504 NHLRC4P0CG21 123 aaPredicted RBP16.51■□□□□ 0.23
SSPN-204ENST00000535504 EDN2P20800 178 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 MLANAQ16655 118 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 SPANXN5Q5MJ07 72 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 TOMM20LQ6UXN7 152 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 TMEM61Q8N0U2 210 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 WDR89Q96FK6 387 aaPredicted RBP16.51■□□□□ 0.23
SSPN-204ENST00000535504 NEURL2Q9BR09 285 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 SEC22CQ9BRL7 303 aa16.51■□□□□ 0.23
SSPN-204ENST00000535504 SSSCA1O60232 199 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 NPPCP23582 126 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 TIGITQ495A1 244 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 ZBTB8BQ8NAP8 495 aaPredicted RBP16.5■□□□□ 0.23
SSPN-204ENST00000535504 NPIPB3Q92617 1050 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 SPAG8Q99932 426 aaPredicted RBP16.5■□□□□ 0.23
SSPN-204ENST00000535504 RHPN1-AS1Q9BWJ2 59 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 PSENENQ9NZ42 101 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 SMPXQ9UHP9 88 aa16.5■□□□□ 0.23
SSPN-204ENST00000535504 ZFP92A6NM28 416 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 PRAF2O60831 178 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 YPEL3P61236 119 aaPredicted RBP16.49■□□□□ 0.23
SSPN-204ENST00000535504 PAFAH1B2P68402 229 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 ID3Q02535 119 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 OR4D5Q8NGN0 318 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 GRAMD2BQ96HH9 432 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 RAB40CQ96S21 281 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 PFDN2Q9UHV9 154 aa16.49■□□□□ 0.23
SSPN-204ENST00000535504 OR4C46A6NHA9 309 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 L7N2F9 121 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 IL5P05113 134 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 IGHV4-30-4P0DP06 118 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 POLR2GP62487 172 aaKnown RBP eCLIP16.48■□□□□ 0.23
SSPN-204ENST00000535504 VAMP2P63027 116 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 C11orf87Q6NUJ2 197 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 GSG1LQ6UXU4 331 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 TMEM170AQ8WVE7 144 aa16.48■□□□□ 0.23
SSPN-204ENST00000535504 MRPL36Q9P0J6 103 aaKnown RBP16.48■□□□□ 0.23
SSPN-204ENST00000535504 ZNF785A8K8V0 405 aa16.47■□□□□ 0.23
SSPN-204ENST00000535504 MPTX1A8MV57 137 aa16.47■□□□□ 0.23
SSPN-204ENST00000535504 TSPAN4O14817 238 aa16.47■□□□□ 0.23
SSPN-204ENST00000535504 FRMD6-AS1P0C7T7 363 aa16.47■□□□□ 0.23
SSPN-204ENST00000535504 IGLC1P0CG04 106 aa16.47■□□□□ 0.23
SSPN-204ENST00000535504 EIF2B2P49770 351 aaKnown RBP16.47■□□□□ 0.23
SSPN-204ENST00000535504 SELENOKQ9Y6D0 94 aa16.47■□□□□ 0.23
SSPN-204ENST00000535504 DNAH3Q8TD57 4116 aa16.46■□□□□ 0.23
SSPN-204ENST00000535504 INMT-MINDY4F8WBC2 141 aa16.46■□□□□ 0.23
SSPN-204ENST00000535504 H3BP45 60 aa16.46■□□□□ 0.23
SSPN-204ENST00000535504 CHEK1O14757 476 aa16.46■□□□□ 0.23
SSPN-204ENST00000535504 RD3LP0DJH9 198 aa16.46■□□□□ 0.23
SSPN-204ENST00000535504 PVALBP20472 110 aaPredicted RBP16.46■□□□□ 0.23
SSPN-204ENST00000535504 RPL11P62913 178 aaKnown RBP16.46■□□□□ 0.23
SSPN-204ENST00000535504 NRARPQ7Z6K4 114 aa16.46■□□□□ 0.23
SSPN-204ENST00000535504 IGHV3-49A0A0A0MS15 119 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 A8MZ25 164 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 OR11H12B2RN74 326 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 CCSO14618 274 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 TOMM40O96008 361 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 IGKV1-17P01599 117 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 NUP62P37198 522 aaPredicted RBP16.45■□□□□ 0.22
SSPN-204ENST00000535504 AKR1C1Q04828 323 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 Q8N1Y9 231 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 SMIM8Q96KF7 97 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 ZMAT4Q9H898 229 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 ZFAND3Q9H8U3 227 aa16.45■□□□□ 0.22
SSPN-204ENST00000535504 PRKDCP78527 4128 aaKnown RBP16.44■□□□□ 0.22
SSPN-204ENST00000535504 IL4P05112 153 aa16.44■□□□□ 0.22
SSPN-204ENST00000535504 CMC4P56277 68 aaPredicted RBP16.44■□□□□ 0.22
SSPN-204ENST00000535504 TAS2R30P59541 319 aa16.44■□□□□ 0.22
SSPN-204ENST00000535504 IFITM3Q01628 133 aa16.44■□□□□ 0.22
SSPN-204ENST00000535504 GAMTQ14353 236 aa16.44■□□□□ 0.22
SSPN-204ENST00000535504 C2orf50Q96LR7 162 aa16.44■□□□□ 0.22
SSPN-204ENST00000535504 ASCL2Q99929 193 aa16.44■□□□□ 0.22
SSPN-204ENST00000535504 IGHV3OR16-13A0A075B7E8 117 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 IGHV3-74A0A0B4J1X5 117 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 SMCO3A2RU48 225 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 SNRPGP15A8MWD9 76 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 DNASE2O00115 360 aaPredicted RBP16.43■□□□□ 0.22
SSPN-204ENST00000535504 TSC22D2O75157 780 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 HNRNPCP07910 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
SSPN-204ENST00000535504 CD7P09564 240 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 S100A7P31151 101 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 OR8G2PQ6IF36 304 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 TCF24Q7RTU0 167 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 OR51G1Q8NGK1 321 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 RNF2Q99496 336 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 RABAC1Q9UI14 185 aa16.43■□□□□ 0.22
SSPN-204ENST00000535504 LSM5Q9Y4Y9 91 aaKnown RBP16.43■□□□□ 0.22
SSPN-204ENST00000535504 BCAP31P51572 246 aa16.42■□□□□ 0.22
SSPN-204ENST00000535504 OR10P1Q8NGE3 313 aa16.42■□□□□ 0.22
SSPN-204ENST00000535504 ST8SIA2Q92186 375 aa16.42■□□□□ 0.22
SSPN-204ENST00000535504 SRD5A3Q9H8P0 318 aa16.42■□□□□ 0.22
SSPN-204ENST00000535504 MGAT4CQ9UBM8 478 aa16.42■□□□□ 0.22
SSPN-204ENST00000535504 TGP01266 2768 aa16.42■□□□□ 0.22
SSPN-204ENST00000535504 CFDP00746 253 aaPredicted RBP16.41■□□□□ 0.22
SSPN-204ENST00000535504 S100A10P60903 97 aa16.41■□□□□ 0.22
SSPN-204ENST00000535504 TRGV9Q99603 122 aa16.41■□□□□ 0.22
SSPN-204ENST00000535504 PBDC1Q9BVG4 233 aa16.41■□□□□ 0.22
SSPN-204ENST00000535504 VSIRQ9H7M9 311 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms